| [6280cc6] | 1 | /* diffusion2d.c: parallel 2d-diffusion equation solver with constant boundaries
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| [696be79] | 2 | * slicing matrix as a checker board.
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| [6280cc6] | 3 | * To execute: mpicc diffusion2d.c ; mpiexec -n 4 ./a.out 2 2
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| 4 | * To verify: civl verify diffusion2d.c
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| [696be79] | 5 | */
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| 6 | #include<stdio.h>
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| 7 | #include<stdlib.h>
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| 8 | #include<assert.h>
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| 9 | #include<string.h>
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| 10 | #include<mpi.h>
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| 11 |
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| 12 | /* Message tags */
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| 13 | #define FROMLEFT 0
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| 14 | #define FROMRIGHT 1
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| 15 | #define FROMTOP 2
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| 16 | #define FROMBOTTOM 3
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| 17 | #define DATAPASS 4
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| 18 | #define comm MPI_COMM_WORLD
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| 19 |
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| 20 | #ifdef _CIVL
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| 21 |
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| [6280cc6] | 22 | $input long NXB = 5; //nx upper bound
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| 23 | $input long nx; //global number of columns in matrix
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| [696be79] | 24 | $assume 1 <= nx && nx <= NXB;
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| [6280cc6] | 25 | $input long NYB = 5; //ny upper bound
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| 26 | $input long ny; //global number of rows of matrix
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| [696be79] | 27 | $assume 1 <= ny && ny <= NYB;
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| [6280cc6] | 28 | $input double u_init[ny+2][nx+2]; //initial value of temperatures, including boundaries
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| 29 | $input double k; //constant coefficient
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| [696be79] | 30 | $assume k > 0.0 && k < 0.5;
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| [6280cc6] | 31 | $input int NSTEPSB = 3; //boundary of number of steps
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| 32 | $input int nsteps; //number of steps
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| [696be79] | 33 | $assume 1<=nsteps && nsteps<=NSTEPSB;
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| [6280cc6] | 34 | $input int wstep = 1; //write frame every this many time steps
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| 35 | double oracle[nsteps][ny+2][nx+2]; //solution computed sequentially, done by proc 0 only
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| 36 | $input int NPROCSXB; //bound number of components of columns
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| 37 | $input int NPROCSX = 2; //number of components of columns
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| 38 | $assume NPROCSX > 1 && NPROCSX <= NPROCSXB;
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| 39 | $input int NPROCSYB; //bound number of components of rows
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| 40 | $input int NPROCSY = 2; //number of components of rows
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| 41 | $assume NPROCSY > 1 && NPROCSY <= NPROCSYB;
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| 42 | $input int _NPROCS = NPROCSX * NPROCSY;
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| 43 |
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| [696be79] | 44 | #else
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| 45 |
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| [6280cc6] | 46 | long nx, ny;
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| 47 | int nsteps, wstep;
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| [696be79] | 48 | int NPROCSX, NPROCSY;
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| [6280cc6] | 49 | double constTemp; //value of constant boundaries for test
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| 50 | double initTemp; //value of initial tempretrue for test
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| [696be79] | 51 | double k;
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| 52 |
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| 53 | #endif
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| 54 |
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| 55 | /* Global variables */
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| [6280cc6] | 56 | int nprocs, rank, left, right, top, bottom;
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| 57 | int nxl, nyl;
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| 58 | long firstCol, firstRow;
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| [696be79] | 59 | double ** u_curr;
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| 60 | double ** u_next;
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| 61 |
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| [6280cc6] | 62 | /* Following book keeping functions are designed based on such orgnization:
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| 63 | * row 0: 0 1 2
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| 64 | * row 1: 3 4 5
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| 65 | * ... */
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| [696be79] | 66 | /* Compute the global column index of cells owned by the process */
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| [6280cc6] | 67 | long firstColForProc(int rank) {
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| 68 | long tmp = (rank - (rank / NPROCSX)*NPROCSX)*nx;
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| 69 |
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| 70 | return tmp/NPROCSX;
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| [696be79] | 71 | }
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| 72 |
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| 73 | /* Compute the global row index of cells owned by the process */
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| [6280cc6] | 74 | long firstRowForProc(int rank) {
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| 75 | long tmp = ((rank / NPROCSX)*ny);
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| 76 |
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| 77 | return tmp/NPROCSY;
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| [696be79] | 78 | }
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| 79 |
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| 80 | /* Computes the number of columns owned by the process */
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| 81 | int countColForProc(int rank) {
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| [6280cc6] | 82 | long a = firstColForProc(rank);
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| 83 | long b;
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| [696be79] | 84 |
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| 85 | if((rank / NPROCSX) == ((rank+1) / NPROCSX))
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| 86 | b = firstColForProc(rank+1);
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| 87 | else
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| 88 | b = nx;
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| 89 | return b - a;
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| 90 | }
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| 91 |
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| 92 | /* Computes the number of rows owned by the process */
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| 93 | int countRowForProc(int rank) {
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| [6280cc6] | 94 | long a = firstRowForProc(rank);
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| 95 | long b = firstRowForProc(rank+NPROCSX);
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| [696be79] | 96 |
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| 97 | return b - a;
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| 98 | }
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| 99 |
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| 100 | /* Get the owner process of the given cell */
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| [6280cc6] | 101 | int OWNER(long col, long row) {
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| 102 | long tmp = ((NPROCSY * (row+1))-1);
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| 103 | int procRow = tmp / ny;
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| 104 | int procCol;
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| 105 |
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| 106 | tmp = ((col + 1) * NPROCSX - 1);
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| 107 | procCol = tmp / nx;
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| 108 | tmp = procRow * NPROCSX;
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| 109 | return tmp + procCol;
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| [696be79] | 110 | }
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| 111 |
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| 112 |
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| [6280cc6] | 113 | /* initialize all data values owned by each process */
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| 114 | void initData() {
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| [696be79] | 115 | #ifdef _CIVL
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| 116 |
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| 117 | // sets vertical constant boundaries
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| 118 | if(left == MPI_PROC_NULL)
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| [6280cc6] | 119 | for(int i=0; i<nyl+2; i++)
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| 120 | u_next[i][0] = u_curr[i][0] = u_init[i + firstRow][0];
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| [696be79] | 121 | if(right == MPI_PROC_NULL)
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| [6280cc6] | 122 | for(int i=0; i<nyl+2; i++)
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| 123 | u_next[i][nxl+1] = u_curr[i][nxl+1] = u_init[i + firstRow][nx+1];
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| [696be79] | 124 | // sets horizontal constant boundaries
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| 125 | if(top == MPI_PROC_NULL)
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| [6280cc6] | 126 | for(int i=0; i<nxl+2; i++)
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| 127 | u_next[0][i] = u_curr[0][i] = u_init[0][i + firstCol];
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| [696be79] | 128 | if(bottom == MPI_PROC_NULL)
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| [6280cc6] | 129 | for(int i=0; i<nxl+2; i++)
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| 130 | u_next[nyl+1][i] = u_curr[nyl+1][i] = u_init[ny+1][i + firstCol];
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| 131 | for(int i=1; i<nyl+1; i++)
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| 132 | memcpy(&u_curr[i][1], &u_init[firstRow + i][firstCol + 1], nxl * sizeof(double));
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| 133 |
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| 134 | #else
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| 135 |
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| 136 | for(int i=0; i < nyl+2; i++)
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| 137 | for(int j=0; j < nxl+2; j++)
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| 138 | if(i == 0 || j == 0 || i == nyl+1 || j == nxl+1)
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| 139 | u_next[i][j] = u_curr[i][j] = constTemp;
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| 140 | else
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| 141 | u_curr[i][j] = initTemp;
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| 142 |
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| [696be79] | 143 | #endif
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| [6280cc6] | 144 | }
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| [696be79] | 145 |
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| 146 | /* Initialize all global variables */
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| 147 | void initialization(int argc, char * argv[]) {
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| 148 | #ifndef _CIVL
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| 149 |
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| 150 | nsteps = 300;
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| 151 | wstep = 5;
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| 152 | nx = 15;
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| 153 | ny = 15;
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| 154 | if(argc < 3) {
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| [6280cc6] | 155 | printf("Program needs 2 arguments to specify the number of processes in x direction and y direction:\n"
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| 156 | "It should go with the format: mpiexec -n NPROCS diffusion2d "
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| 157 | "NPROCSX NPROCSY\n"
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| 158 | "NPROCSX: number of processes in x direction\n"
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| 159 | "NPROCSY: number of processes in y direction\n"
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| 160 | "NPROCS: the product of NPROCSX and NPROCSY\n");
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| [696be79] | 161 | assert(0);
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| 162 | }
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| 163 | NPROCSX = atoi(argv[1]);
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| 164 | NPROCSY = atoi(argv[2]);
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| [6280cc6] | 165 | assert(0 < NPROCSX * NPROCSY &&
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| 166 | NPROCSX * NPROCSY <=nprocs);
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| [696be79] | 167 | constTemp = 0.0;
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| 168 | initTemp = 100.0;
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| 169 | k = 0.13;
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| [6280cc6] | 170 | printf("Diffusion2d with k=%f, nx=%ld, ny=%ld, nsteps=%d, wstep=%d\n",
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| [696be79] | 171 | k, nx, ny, nsteps, wstep);
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| 172 |
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| 173 | #endif
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| 174 |
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| 175 | nxl = countColForProc(rank);
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| 176 | nyl = countRowForProc(rank);
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| 177 | u_curr = (double **)malloc((nyl + 2) * sizeof(double *));
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| 178 | assert(u_curr);
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| 179 | u_next = (double **)malloc((nyl + 2) * sizeof(double *));
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| 180 | assert(u_next);
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| [6280cc6] | 181 | for(int i=0; i < nyl + 2; i++){
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| [696be79] | 182 | u_curr[i] = (double *)malloc((nxl + 2) * sizeof(double));
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| 183 | assert(u_curr[i]);
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| 184 | u_next[i] = (double *)malloc((nxl + 2) * sizeof(double));
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| 185 | assert(u_next[i]);
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| 186 | }
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| 187 | firstCol = firstColForProc(rank);
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| 188 | firstRow = firstRowForProc(rank);
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| 189 | // computes neighbors
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| 190 | if(firstCol != 0)
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| 191 | left = OWNER(firstCol - 1, firstRow);
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| 192 | else
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| 193 | left = MPI_PROC_NULL;
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| 194 | if(firstRow != 0)
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| 195 | top = OWNER(firstCol, firstRow - 1);
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| 196 | else
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| 197 | top = MPI_PROC_NULL;
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| 198 | if(firstCol + nxl < nx)
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| 199 | right = OWNER(firstCol + nxl, firstRow);
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| 200 | else
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| 201 | right = MPI_PROC_NULL;
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| 202 | if(firstRow + nyl < ny)
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| 203 | bottom = OWNER(firstCol, firstRow + nyl);
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| 204 | else
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| 205 | bottom = MPI_PROC_NULL;
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| [6280cc6] | 206 |
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| [696be79] | 207 | #ifdef _CIVL
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| [6280cc6] | 208 |
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| [696be79] | 209 | // In CIVL mode process with rank 0 will be responsible for computing the diffusion2d equation
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| 210 | // sequentially such that the results can be used to compare with the ones of parallel run.
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| 211 | if(rank == 0) {
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| [6280cc6] | 212 | for(long i = 0; i < ny + 2; i++)
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| 213 | for(long j = 0; j < nx + 2; j++)
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| [696be79] | 214 | oracle[0][i][j] = u_init[i][j];
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| 215 | for(int t=1; t < nsteps; t++)
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| [6280cc6] | 216 | for(long i = 0; i < ny + 2; i++)
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| 217 | for(long j = 0; j < nx + 2; j++)
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| [696be79] | 218 | if(i==0 || j==0 || i == ny + 1 || j == nx + 1)
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| 219 | oracle[t][i][j] = oracle[t-1][i][j];
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| 220 | else
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| 221 | oracle[t][i][j] = oracle[t-1][i][j] +
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| 222 | k*(oracle[t-1][i+1][j] + oracle[t-1][i-1][j] +
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| 223 | oracle[t-1][i][j+1] + oracle[t-1][i][j-1] - 4*oracle[t-1][i][j]);
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| 224 | }
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| 225 |
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| 226 | #endif
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| 227 | }
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| 228 |
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| 229 | void update() {
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| 230 | double **tmp;
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| 231 |
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| [6280cc6] | 232 | for(int i = 1; i < nyl + 1; i++)
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| 233 | for(int j = 1; j < nxl + 1; j++) {
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| [696be79] | 234 | u_next[i][j] = u_curr[i][j] +
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| 235 | k*(u_curr[i+1][j] + u_curr[i-1][j] +
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| 236 | u_curr[i][j+1] + u_curr[i][j-1] - 4*u_curr[i][j]);
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| 237 | }
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| 238 | //swap two pointers
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| 239 | tmp = u_curr;
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| 240 | u_curr = u_next;
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| 241 | u_next = tmp;
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| 242 | }
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| 243 |
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| 244 | void exchange() {
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| 245 | double sendbuf[nyl];
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| 246 | double recvbuf[nyl];
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| 247 |
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| 248 | // sends top string, receives bottom string
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| 249 | MPI_Sendrecv(&u_curr[1][1], nxl, MPI_DOUBLE, top, FROMBOTTOM, &u_curr[nyl+1][1], nxl,
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| 250 | MPI_DOUBLE, bottom, FROMBOTTOM, comm, MPI_STATUS_IGNORE);
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| 251 | // sends bottom string, receives top string
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| 252 | MPI_Sendrecv(&u_curr[nyl][1], nxl, MPI_DOUBLE, bottom, FROMTOP, &u_curr[0][1], nxl,
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| 253 | MPI_DOUBLE, top, FROMTOP, comm, MPI_STATUS_IGNORE);
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| 254 | // sends left most string, receives right most string
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| 255 | for(int i = 0; i < nyl; i++) sendbuf[i] = u_curr[i+1][1];
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| 256 | MPI_Sendrecv(sendbuf, nyl, MPI_DOUBLE, left, FROMRIGHT, recvbuf, nyl,
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| 257 | MPI_DOUBLE, right, FROMRIGHT, comm, MPI_STATUS_IGNORE);
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| 258 | if(right != MPI_PROC_NULL)
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| 259 | for(int i = 0; i < nyl; i++) u_curr[i+1][nxl+1] = recvbuf[i];
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| 260 | // sends right most string, receives left most string
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| 261 | for(int i = 0; i < nyl; i++) sendbuf[i] = u_curr[i+1][nxl];
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| 262 | MPI_Sendrecv(sendbuf, nyl, MPI_DOUBLE, right, FROMLEFT, recvbuf, nyl,
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| 263 | MPI_DOUBLE, left, FROMLEFT, comm, MPI_STATUS_IGNORE);
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| 264 | if(left != MPI_PROC_NULL)
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| 265 | for(int i = 0; i < nyl; i++) u_curr[i+1][0] = recvbuf[i];
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| 266 | }
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| 267 |
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| [6280cc6] | 268 | void printData(int time, int firstCol, int nxl, int currRow, double * buf) {
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| [696be79] | 269 |
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| [6280cc6] | 270 | for(int i=0; i<nxl; i++) {
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| 271 | printf("%6.2f", *(buf + i));
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| [696be79] | 272 | #ifdef _CIVL
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| [6280cc6] | 273 | $assert(*(buf + i) == oracle[time][currRow + 1][firstCol + i + 1]) : \
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| [696be79] | 274 | "Error: disagreement at time %d position [%d][%d]: saw %lf, expected %lf", \
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| [6280cc6] | 275 | time, currRow, firstCol + i,
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| 276 | *(buf + i), oracle[time][currRow + 1][firstCol + i + 1];
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| [696be79] | 277 | #endif
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| 278 | }
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| 279 | }
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| 280 |
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| 281 | void write_frame(int time) {
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| 282 | double * buf; // buffer of data to print
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| 283 |
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| [6280cc6] | 284 | buf = (double *)malloc(nxl * sizeof(double));
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| 285 | //sends data row by row
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| 286 | if(rank != 0){
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| 287 | for(int i=0; i<nyl; i++) {
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| 288 | memcpy(buf, &u_curr[i+1][1], nxl*sizeof(double));
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| 289 | MPI_Send(buf, nxl, MPI_DOUBLE, 0, DATAPASS, comm);
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| [696be79] | 290 | }
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| [6280cc6] | 291 | }
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| 292 | free(buf);
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| [696be79] | 293 | if(rank == 0) {
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| 294 | printf("\n-------------------- time step:%d --------------------\n", time);
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| [6280cc6] | 295 | for(int i=0; i < NPROCSY; i++) {
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| 296 | int numRows = countRowForProc(i*NPROCSX);
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| 297 |
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| 298 | for(int j=0; j < numRows; j++) {
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| 299 | for(int k=i*NPROCSX; k < (i+1)*NPROCSX; k++) {
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| 300 | if(k!=0){
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| 301 | int senderx = firstColForProc(k);
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| 302 | int sendery = firstRowForProc(k);
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| 303 | int senderNxl = countColForProc(k);
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| 304 | double * recvbuf = (double *)malloc(senderNxl * sizeof(double));
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| 305 |
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| 306 | MPI_Recv(recvbuf, senderNxl, MPI_DOUBLE, k, DATAPASS, comm, MPI_STATUS_IGNORE);
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| 307 | printData(time, senderx, senderNxl, sendery+j, recvbuf);
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| 308 | free(recvbuf);
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| 309 | } else {
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| 310 | printData(time, firstCol, nxl, firstRow+j, &u_curr[j+1][1]);
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| 311 | }
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| 312 | }
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| 313 | printf("\n");
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| [696be79] | 314 | }
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| 315 | }
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| [6280cc6] | 316 | }
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| [696be79] | 317 | }
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| 318 |
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| 319 | int main(int argc, char * argv[]) {
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| 320 | int i,j;
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| 321 |
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| 322 | #ifdef _CIVL
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| 323 |
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| 324 | // elaborating nx, ny, NPROCSX and NPROCSY...
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| 325 | elaborate(nx);
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| 326 | elaborate(ny);
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| 327 | elaborate(NPROCSX);
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| 328 | elaborate(NPROCSY);
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| 329 |
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| 330 | #endif
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| 331 | MPI_Init(&argc, &argv);
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| 332 | MPI_Comm_rank(comm, &rank);
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| 333 | MPI_Comm_size(comm, &nprocs);
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| 334 | initialization(argc, argv);
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| [6280cc6] | 335 | initData();
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| [696be79] | 336 | for(i=0; i<nsteps; i++) {
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| 337 | if(nxl != 0 && nyl != 0) {
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| 338 | if(i%wstep == 0)
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| 339 | write_frame(i);
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| 340 | exchange();
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| 341 | update();
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| 342 | }
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| 343 | }
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| 344 | for(i=0; i<nyl+2; i++) {
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| 345 | free(u_curr[i]);
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| 346 | free(u_next[i]);
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| 347 | }
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| 348 | free(u_curr);
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| 349 | free(u_next);
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| 350 | return 0;
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| 351 | }
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