| 1 | /*BHEADER**********************************************************************
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| 2 | * Copyright (c) 2008, Lawrence Livermore National Security, LLC.
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| 3 | * Produced at the Lawrence Livermore National Laboratory.
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| 4 | * This file is part of HYPRE. See file COPYRIGHT for details.
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| 5 | *
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| 6 | * HYPRE is free software; you can redistribute it and/or modify it under the
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| 7 | * terms of the GNU Lesser General Public License (as published by the Free
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| 8 | * Software Foundation) version 2.1 dated February 1999.
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| 9 | *
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| 10 | * $Revision: 2.4 $
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| 11 | ***********************************************************************EHEADER*/
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| 12 |
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| 13 |
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| 14 | /* This is code for the struct assumed partition
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| 15 | AHB 6/05 */
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| 16 |
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| 17 | #include "headers.h"
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| 18 |
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| 19 |
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| 20 | #define REGION_STAT 0
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| 21 | #define NO_REFINE 0
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| 22 | #define REFINE_INFO 0
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| 23 |
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| 24 |
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| 25 | /* functions used in this file to determine the partition - not elsewhere -
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| 26 | have names that start with AP */
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| 27 |
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| 28 | #if 0
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| 29 | int hypre_APFillResponseStructAssumedPart(void *, int, int, void *,MPI_Comm,
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| 30 | void **, int *);
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| 31 | int hypre_APSubdivideRegion(hypre_Box*, int, int, hypre_BoxArray*, int*);
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| 32 | int hypre_APFindMyBoxesInRegions( hypre_BoxArray*, hypre_BoxArray*, int**,
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| 33 | double**);
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| 34 | int hypre_APGetAllBoxesInRegions( hypre_BoxArray*, hypre_BoxArray *, int**,
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| 35 | double**, MPI_Comm);
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| 36 | int hypre_APPruneRegions( hypre_BoxArray*, int** , double**);
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| 37 | int hypre_APShrinkRegions( hypre_BoxArray*, hypre_BoxArray*, MPI_Comm );
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| 38 | int hypre_APRefineRegionsByVol( hypre_BoxArray*, double*, int, double,
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| 39 | int, int *, MPI_Comm);
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| 40 |
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| 41 | #endif
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| 42 |
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| 43 | /******************************************************************************
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| 44 | *
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| 45 | * Given a region, subdivide the region equally a specified number of times.
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| 46 | * For dimension d, each "level" is a subdivison of 2^d. The box_array
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| 47 | * is adjusted to have space for l(2^d)^level boxes
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| 48 | * We are bisecting each dimension (level) times.
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| 49 | *
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| 50 | * We may want to add min. size parameter for dimension of results
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| 51 | * regions (currently 2) - i.e., don't bisect a dimention if it will
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| 52 | * be smaller than 2 grid points, for example
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| 53 | *****************************************************************************/
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| 54 |
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| 55 | int hypre_APSubdivideRegion( hypre_Box *region, int dim, int level,
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| 56 | hypre_BoxArray *box_array, int *num_new_boxes)
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| 57 | {
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| 58 |
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| 59 | int i, j, k, width, sz;
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| 60 | int total, start, div[3];
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| 61 | int extra, points, count;
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| 62 | int *partition[3];
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| 63 | int *xpart,*ypart, *zpart;
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| 64 |
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| 65 | int min_gridpts; /* this should probably be an input parameter */
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| 66 |
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| 67 |
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| 68 | hypre_Index isize, imin, imax;
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| 69 | hypre_Box *box;
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| 70 |
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| 71 |
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| 72 |
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| 73 | /* if level = 0 then no dividing */
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| 74 | if (!level)
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| 75 | {
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| 76 | hypre_BoxArraySetSize(box_array, 1);
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| 77 | hypre_CopyBox(region, hypre_BoxArrayBox(box_array, 0));
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| 78 | *num_new_boxes = 1;
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| 79 | return hypre_error_flag;
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| 80 | }
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| 81 |
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| 82 | /* get the size of the box in each dimension */
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| 83 | /* size = # of grid points, =1 for un-used dimensions.
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| 84 | note: cell-centered! */
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| 85 |
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| 86 | hypre_BoxGetSize(region , isize);
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| 87 |
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| 88 |
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| 89 | /* div = num of regions in each dimension */
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| 90 |
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| 91 | /* figure out the number of regions - make sure
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| 92 | the sizes will contain the min
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| 93 | number of gridpoints - or divide less in that dimension
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| 94 | -we are requiring at least min_gridpts in
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| 95 | a region dimension */
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| 96 |
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| 97 | min_gridpts = 4;
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| 98 |
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| 99 |
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| 100 | for (i=0; i < 3; i++)
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| 101 | {
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| 102 | div[i] = 1;
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| 103 | sz = hypre_IndexD(isize, i);
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| 104 | for (j = 0; j< level; j++)
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| 105 | {
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| 106 | if ( sz >= 2*div[i]*min_gridpts) /* each division cuts in half */
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| 107 | {
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| 108 | div[i] = div[i]*2;
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| 109 | }
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| 110 | }
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| 111 | }
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| 112 |
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| 113 | /* space for each partition - aliasing makes debugging with tv easier :)*/
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| 114 | xpart = hypre_TAlloc(int, div[0]+1);
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| 115 | ypart = hypre_TAlloc(int, div[1]+1);
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| 116 | zpart = hypre_TAlloc(int, div[2]+1);
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| 117 | partition[0] = xpart;
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| 118 | partition[1] = ypart;
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| 119 | partition[2] = zpart;
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| 120 |
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| 121 | /* total number of regions to create*/
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| 122 | total = 1;
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| 123 | for (i=0; i < 3; i++)
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| 124 | {
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| 125 | total = total*(div[i]);
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| 126 | }
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| 127 |
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| 128 | *num_new_boxes = total;
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| 129 |
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| 130 | /*prepare box array*/
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| 131 | hypre_BoxArraySetSize(box_array, total);
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| 132 |
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| 133 | /*divide each dimension */
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| 134 |
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| 135 | for (j=0; j < 3; j++)
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| 136 | {
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| 137 | start = hypre_BoxIMinD(region, j);
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| 138 | partition[j][0] = start;
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| 139 | /* we want to count grid points (these are cell-centered)*/
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| 140 | points = hypre_IndexD(isize, j);
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| 141 | width = points/div[j];
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| 142 | extra = points - width*div[j];
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| 143 | for (i = 1; i < div[j]; i++)
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| 144 | {
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| 145 | partition[j][i] = partition[j][i-1] + width;
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| 146 | if (i <= extra) partition[j][i]++;
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| 147 | }
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| 148 | partition[j][div[j]] = hypre_BoxIMaxD(region, j) + 1;
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| 149 | }
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| 150 |
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| 151 | /* now create the new regions */
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| 152 | count = 0;
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| 153 |
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| 154 | for (i = 0; i < (div[0]); i++)
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| 155 | {
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| 156 | for (j = 0; j < (div[1]); j++)
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| 157 | {
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| 158 | for (k = 0; k < (div[2]); k++)
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| 159 | {
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| 160 | hypre_SetIndex(imin, partition[0][i], partition[1][j],
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| 161 | partition[2][k]);
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| 162 | hypre_SetIndex(imax, partition[0][i+1]-1, partition[1][j+1]-1,
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| 163 | partition[2][k+1]-1);
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| 164 | box = hypre_BoxArrayBox(box_array, count);
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| 165 | hypre_BoxSetExtents( box, imin, imax );
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| 166 | count++;
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| 167 |
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| 168 | }
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| 169 | }
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| 170 | }
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| 171 |
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| 172 |
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| 173 | /* clean up */
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| 174 | hypre_TFree(xpart);
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| 175 | hypre_TFree(ypart);
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| 176 | hypre_TFree(zpart);
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| 177 |
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| 178 | return hypre_error_flag;
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| 179 |
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| 180 |
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| 181 | }
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| 182 |
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| 183 |
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| 184 | /******************************************************************************
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| 185 | *
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| 186 | * Given a list of regions, find out how many of *my* boxes are contained
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| 187 | * in each region
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| 188 | *
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| 189 | *****************************************************************************/
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| 190 |
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| 191 | int hypre_APFindMyBoxesInRegions( hypre_BoxArray *region_array,
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| 192 | hypre_BoxArray *my_box_array,
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| 193 | int **p_count_array, double **p_vol_array)
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| 194 | {
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| 195 |
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| 196 | int i,j, d, grow;
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| 197 | int myid;
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| 198 | int num_boxes, num_regions;
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| 199 | int *count_array;
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| 200 | double *vol_array;
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| 201 | int grow_array[6];
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| 202 |
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| 203 | hypre_Box *my_box, *result_box, *grow_box;
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| 204 | hypre_Box *region;
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| 205 |
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| 206 |
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| 207 | /* this is just for debuugging - need myid for print statement */
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| 208 | MPI_Comm_rank(MPI_COMM_WORLD, &myid);
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| 209 |
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| 210 | num_boxes = hypre_BoxArraySize(my_box_array);
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| 211 | num_regions = hypre_BoxArraySize(region_array);
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| 212 |
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| 213 | count_array = *p_count_array;
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| 214 | vol_array = *p_vol_array;
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| 215 |
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| 216 |
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| 217 | /* may need to add some sort of sorting to make this
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| 218 | more efficient - though we shouldn't have many regions*/
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| 219 |
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| 220 | /* note: a box can be in more than one region */
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| 221 |
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| 222 | result_box = hypre_BoxCreate();
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| 223 | grow_box = hypre_BoxCreate();
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| 224 |
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| 225 | for (i=0; i< num_regions; i++)
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| 226 | {
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| 227 | count_array[i] = 0;
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| 228 | vol_array[i] = 0.0;
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| 229 |
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| 230 | region = hypre_BoxArrayBox(region_array, i);
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| 231 |
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| 232 | for (j = 0; j< num_boxes; j++)
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| 233 | {
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| 234 | my_box = hypre_BoxArrayBox(my_box_array, j);
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| 235 | /* check if its a zero volume box - if so it still need to be counted - so
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| 236 | expand till vol. is non-zero then intersect */
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| 237 | if (hypre_BoxVolume(my_box) == 0)
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| 238 | {
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| 239 | hypre_CopyBox(my_box, grow_box);
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| 240 | for (d = 0; d < 3; d++)
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| 241 | {
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| 242 | if(!hypre_BoxSizeD(my_box, d))
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| 243 | {
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| 244 | grow = (hypre_BoxIMinD(my_box, d) - hypre_BoxIMaxD(my_box, d) + 1)/2;
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| 245 | grow_array[2*d] = grow;
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| 246 | grow_array[2*d+1] = grow;
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| 247 | }
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| 248 | else
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| 249 | {
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| 250 | grow_array[2*d] = 0;
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| 251 | grow_array[2*d+1] = 0;
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| 252 | }
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| 253 | }
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| 254 | /* expand the grow box (leave our box untouched)*/
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| 255 | hypre_BoxExpand(grow_box, grow_array);
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| 256 | /* do they intersect?*/
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| 257 | hypre_IntersectBoxes( grow_box, region, result_box);
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| 258 | }
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| 259 | else
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| 260 | {
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| 261 | /* do they intersect?*/
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| 262 | hypre_IntersectBoxes( my_box, region, result_box);
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| 263 | }
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| 264 | if ( hypre_BoxVolume(result_box) > 0 )
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| 265 | {
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| 266 | count_array[i]++;
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| 267 | vol_array[i] += (double) hypre_BoxVolume(result_box);
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| 268 | }
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| 269 | }
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| 270 | }
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| 271 |
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| 272 |
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| 273 | /* clean up */
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| 274 | hypre_BoxDestroy(result_box);
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| 275 | hypre_BoxDestroy(grow_box);
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| 276 |
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| 277 | /* output */
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| 278 | *p_count_array = count_array;
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| 279 | *p_vol_array = vol_array;
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| 280 |
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| 281 |
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| 282 | return hypre_error_flag;
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| 283 |
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| 284 | }
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| 285 |
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| 286 | /******************************************************************************
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| 287 | *
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| 288 | * Given a list of regions, find out how many global boxes are contained
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| 289 | * in each region.
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| 290 | *
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| 291 | * assumes that p_count_array and p_vol_array have already been allocated
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| 292 | *
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| 293 | *****************************************************************************/
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| 294 |
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| 295 | int hypre_APGetAllBoxesInRegions( hypre_BoxArray *region_array,
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| 296 | hypre_BoxArray *my_box_array,
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| 297 | int **p_count_array, double **p_vol_array,
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| 298 | MPI_Comm comm )
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| 299 | {
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| 300 |
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| 301 | int i;
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| 302 | int *count_array;
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| 303 | int num_regions;
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| 304 | int *send_buf_count;
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| 305 | double *send_buf_vol;
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| 306 | double *vol_array;
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| 307 | double *dbl_vol_and_count;
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| 308 |
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| 309 |
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| 310 | count_array = *p_count_array;
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| 311 | vol_array = *p_vol_array;
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| 312 |
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| 313 |
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| 314 | /*first get a count and volume of my boxes in each region */
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| 315 | num_regions = hypre_BoxArraySize(region_array);
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| 316 |
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| 317 | send_buf_count = hypre_CTAlloc(int, num_regions);
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| 318 | send_buf_vol = hypre_CTAlloc(double, num_regions*2); /*allocate double*/
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| 319 |
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| 320 | dbl_vol_and_count = hypre_CTAlloc(double, num_regions*2); /*allocate double*/
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| 321 |
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| 322 | hypre_APFindMyBoxesInRegions( region_array, my_box_array, &send_buf_count,
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| 323 | &send_buf_vol);
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| 324 |
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| 325 |
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| 326 | /* copy ints to doubles so we can do one all_reduce */
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| 327 | for (i=0; i< num_regions; i++)
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| 328 | {
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| 329 | send_buf_vol[num_regions+i] = (double) send_buf_count[i];
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| 330 | }
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| 331 |
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| 332 | MPI_Allreduce(send_buf_vol, dbl_vol_and_count, num_regions*2, MPI_DOUBLE,
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| 333 | MPI_SUM, comm);
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| 334 |
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| 335 | /*unpack*/
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| 336 | for (i=0; i< num_regions; i++)
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| 337 | {
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| 338 | vol_array[i] = dbl_vol_and_count[i];
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| 339 | count_array[i] = (int) dbl_vol_and_count[num_regions+i];
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| 340 | }
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| 341 |
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| 342 |
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| 343 | /* clean up*/
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| 344 | hypre_TFree(send_buf_count);
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| 345 | hypre_TFree(send_buf_vol);
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| 346 | hypre_TFree(dbl_vol_and_count);
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| 347 |
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| 348 |
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| 349 | /* output */
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| 350 | *p_count_array = count_array;
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| 351 | *p_vol_array = vol_array;
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| 352 |
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| 353 | return hypre_error_flag;
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| 354 |
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| 355 | }
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| 356 |
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| 357 |
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| 358 | /******************************************************************************
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| 359 | *
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| 360 | * Given a list of regions, shrink regions according to min and max extents
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| 361 | *
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| 362 | *****************************************************************************/
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| 363 |
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| 364 | int hypre_APShrinkRegions( hypre_BoxArray *region_array,
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| 365 | hypre_BoxArray *my_box_array, MPI_Comm comm )
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| 366 | {
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| 367 |
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| 368 | /* These regions should all be non-empty at the global level*/
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| 369 |
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| 370 |
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| 371 | int i,j, d;
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| 372 | int myid;
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| 373 | int num_boxes, num_regions;
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| 374 | int *indices, *recvbuf;
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| 375 | int count = 0;
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| 376 | int grow, grow_array[6];
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| 377 |
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| 378 |
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| 379 | hypre_Box *my_box, *result_box, *grow_box;
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| 380 | hypre_Box *region;
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| 381 | hypre_Index imin, imax;
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| 382 |
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| 383 |
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| 384 | /* printf("SHRINKING!\n"); */
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| 385 |
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| 386 |
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| 387 | MPI_Comm_rank(MPI_COMM_WORLD, &myid);
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| 388 |
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| 389 | num_boxes = hypre_BoxArraySize(my_box_array);
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| 390 | num_regions = hypre_BoxArraySize(region_array);
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| 391 |
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| 392 | indices = hypre_CTAlloc(int, num_regions*6);
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| 393 | recvbuf = hypre_CTAlloc(int, num_regions*6);
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| 394 |
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| 395 | result_box = hypre_BoxCreate();
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| 396 |
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| 397 | /* allocate for a grow box */
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| 398 | grow_box = hypre_BoxCreate();
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| 399 |
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| 400 | /* Look locally at my boxes */
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| 401 | /* for each region*/
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| 402 | for (i=0; i< num_regions; i++)
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| 403 | {
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| 404 | count = 0; /*number of my boxes in this region */
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| 405 |
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| 406 | /* get the region box*/
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| 407 | region = hypre_BoxArrayBox(region_array, i);
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| 408 |
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| 409 |
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| 410 | /*go through each of my local boxes */
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| 411 | for (j = 0; j< num_boxes; j++)
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| 412 | {
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| 413 | my_box = hypre_BoxArrayBox(my_box_array, j);
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| 414 |
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| 415 | /* check if its a zero volume box - if so it still need to be checked - so
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| 416 | expand till vol. is non-zero then intersect */
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| 417 | if (hypre_BoxVolume(my_box) == 0)
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| 418 | {
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| 419 | hypre_CopyBox(my_box, grow_box);
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| 420 | for (d = 0; d < 3; d++)
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| 421 | {
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| 422 | if(!hypre_BoxSizeD(my_box, d))
|
|---|
| 423 | {
|
|---|
| 424 | grow = (hypre_BoxIMinD(my_box, d) -
|
|---|
| 425 | hypre_BoxIMaxD(my_box, d) + 1)/2;
|
|---|
| 426 | grow_array[2*d] = grow;
|
|---|
| 427 | grow_array[2*d+1] = grow;
|
|---|
| 428 | }
|
|---|
| 429 | else
|
|---|
| 430 | {
|
|---|
| 431 | grow_array[2*d] = 0;
|
|---|
| 432 | grow_array[2*d+1] = 0;
|
|---|
| 433 | }
|
|---|
| 434 | }
|
|---|
| 435 | /* expand the grow box (leave our box untouched)*/
|
|---|
| 436 | hypre_BoxExpand(grow_box, grow_array);
|
|---|
| 437 | /* do they intersect?*/
|
|---|
| 438 | hypre_IntersectBoxes( grow_box, region, result_box);
|
|---|
| 439 | }
|
|---|
| 440 | else
|
|---|
| 441 | {
|
|---|
| 442 | /* do they intersect?*/
|
|---|
| 443 | hypre_IntersectBoxes( my_box, region, result_box);
|
|---|
| 444 | }
|
|---|
| 445 |
|
|---|
| 446 | if ( hypre_BoxVolume(result_box) > 0 ) /* they intersect*/
|
|---|
| 447 | {
|
|---|
| 448 |
|
|---|
| 449 | if (!count) /* set min and max for first box */
|
|---|
| 450 | {
|
|---|
| 451 | for (d = 0; d < 3; d++)
|
|---|
| 452 | {
|
|---|
| 453 | indices[i*6+d] = hypre_BoxIMinD(result_box, d);
|
|---|
| 454 | indices[i*6+3+d] = hypre_BoxIMaxD(result_box, d);
|
|---|
| 455 | }
|
|---|
| 456 |
|
|---|
| 457 | }
|
|---|
| 458 |
|
|---|
| 459 | count++;
|
|---|
| 460 |
|
|---|
| 461 | /* boxes intersect - so get max and min extents
|
|---|
| 462 | of the result box (this keeps the bounds inside
|
|---|
| 463 | the region */
|
|---|
| 464 | for (d = 0; d < 3; d++)
|
|---|
| 465 | {
|
|---|
| 466 | indices[i*6+d] = hypre_min(indices[i*6+d],
|
|---|
| 467 | hypre_BoxIMinD(result_box, d));
|
|---|
| 468 | indices[i*6+3+d] = hypre_max(indices[i*6+3+d],
|
|---|
| 469 | hypre_BoxIMaxD(result_box, d));
|
|---|
| 470 | }
|
|---|
| 471 | }
|
|---|
| 472 | }
|
|---|
| 473 | /* now if we had no boxes in that region, set the min to the max
|
|---|
| 474 | extents of the region and the max to the min! */
|
|---|
| 475 |
|
|---|
| 476 | if (!count)
|
|---|
| 477 | {
|
|---|
| 478 | for (d = 0; d < 3; d++)
|
|---|
| 479 | {
|
|---|
| 480 | indices[i*6+d] = hypre_BoxIMaxD(region, d);
|
|---|
| 481 | indices[i*6+3+d] = hypre_BoxIMinD(region, d);
|
|---|
| 482 | }
|
|---|
| 483 | }
|
|---|
| 484 |
|
|---|
| 485 | /*negate max indices for the allreduce */
|
|---|
| 486 | /* note: min(x)= -max(-x) */
|
|---|
| 487 |
|
|---|
| 488 | for (d = 0; d < 3; d++)
|
|---|
| 489 | {
|
|---|
| 490 | indices[i*6+3+d] = -indices[i*6+3+d];
|
|---|
| 491 | }
|
|---|
| 492 |
|
|---|
| 493 |
|
|---|
| 494 | }
|
|---|
| 495 |
|
|---|
| 496 | /* Now do an allreduce to get the global information */
|
|---|
| 497 |
|
|---|
| 498 | /* now do an all reduce on the size and volume */
|
|---|
| 499 | MPI_Allreduce(indices, recvbuf, num_regions*6, MPI_INT, MPI_MIN, comm);
|
|---|
| 500 |
|
|---|
| 501 | /*now unpack the "shrunk" regions */
|
|---|
| 502 | /* for each region*/
|
|---|
| 503 | for (i=0; i< num_regions; i++)
|
|---|
| 504 | {
|
|---|
| 505 | /* get the region box*/
|
|---|
| 506 | region = hypre_BoxArrayBox(region_array, i);
|
|---|
| 507 |
|
|---|
| 508 | /*resize the box*/
|
|---|
| 509 | hypre_SetIndex(imin, recvbuf[i*6], recvbuf[i*6+1], recvbuf[i*6+2]);
|
|---|
| 510 | hypre_SetIndex(imax, -recvbuf[i*6+3], -recvbuf[i*6+4], -recvbuf[i*6+5]);
|
|---|
| 511 |
|
|---|
| 512 | hypre_BoxSetExtents(region, imin, imax );
|
|---|
| 513 |
|
|---|
| 514 | /*add: check to see whether any shrinking is actually occuring*/
|
|---|
| 515 |
|
|---|
| 516 | }
|
|---|
| 517 |
|
|---|
| 518 |
|
|---|
| 519 | /* clean up */
|
|---|
| 520 | hypre_TFree(recvbuf);
|
|---|
| 521 | hypre_TFree(indices);
|
|---|
| 522 | hypre_BoxDestroy(result_box);
|
|---|
| 523 | hypre_BoxDestroy(grow_box);
|
|---|
| 524 |
|
|---|
| 525 |
|
|---|
| 526 | return hypre_error_flag;
|
|---|
| 527 |
|
|---|
| 528 |
|
|---|
| 529 |
|
|---|
| 530 | }
|
|---|
| 531 |
|
|---|
| 532 |
|
|---|
| 533 |
|
|---|
| 534 | /******************************************************************************
|
|---|
| 535 | *
|
|---|
| 536 | * Given a list of regions, eliminate empty regions
|
|---|
| 537 | *
|
|---|
| 538 | *****************************************************************************/
|
|---|
| 539 |
|
|---|
| 540 |
|
|---|
| 541 |
|
|---|
| 542 | int hypre_APPruneRegions( hypre_BoxArray *region_array, int **p_count_array,
|
|---|
| 543 | double **p_vol_array )
|
|---|
| 544 | {
|
|---|
| 545 |
|
|---|
| 546 |
|
|---|
| 547 | /*-------------------------------------------
|
|---|
| 548 | * parameters:
|
|---|
| 549 | *
|
|---|
| 550 | * region_array = assumed partition regions
|
|---|
| 551 | * count_array = number of global boxes in each region
|
|---|
| 552 | *-------------------------------------------*/
|
|---|
| 553 |
|
|---|
| 554 |
|
|---|
| 555 | int i, j;
|
|---|
| 556 | int num_regions;
|
|---|
| 557 | int count;
|
|---|
| 558 | int *delete_indices;
|
|---|
| 559 |
|
|---|
| 560 | int *count_array;
|
|---|
| 561 | double *vol_array;
|
|---|
| 562 |
|
|---|
| 563 |
|
|---|
| 564 | count_array = *p_count_array;
|
|---|
| 565 | vol_array = *p_vol_array;
|
|---|
| 566 |
|
|---|
| 567 |
|
|---|
| 568 | num_regions = hypre_BoxArraySize(region_array);
|
|---|
| 569 | delete_indices = hypre_CTAlloc(int, num_regions);
|
|---|
| 570 | count = 0;
|
|---|
| 571 |
|
|---|
| 572 |
|
|---|
| 573 | /* delete regions with zero elements */
|
|---|
| 574 | for (i=0; i< num_regions; i++)
|
|---|
| 575 | {
|
|---|
| 576 | if (count_array[i] == 0)
|
|---|
| 577 | {
|
|---|
| 578 | delete_indices[count++] = i;
|
|---|
| 579 | }
|
|---|
| 580 |
|
|---|
| 581 | }
|
|---|
| 582 |
|
|---|
| 583 | hypre_DeleteMultipleBoxes( region_array, delete_indices, count );
|
|---|
| 584 |
|
|---|
| 585 | /* adjust count and volume arrays */
|
|---|
| 586 | if (count > 0)
|
|---|
| 587 | {
|
|---|
| 588 | j=0;
|
|---|
| 589 | for (i = delete_indices[0]; (i + j) < num_regions; i++)
|
|---|
| 590 | {
|
|---|
| 591 | if (j < count)
|
|---|
| 592 | {
|
|---|
| 593 | while ((i+j) == delete_indices[j])
|
|---|
| 594 | {
|
|---|
| 595 | j++; /*increase the shift*/
|
|---|
| 596 | if (j == count) break;
|
|---|
| 597 | }
|
|---|
| 598 | }
|
|---|
| 599 | vol_array[i] = vol_array[i+j];
|
|---|
| 600 | count_array[i] = count_array[i+j];
|
|---|
| 601 | }
|
|---|
| 602 | }
|
|---|
| 603 |
|
|---|
| 604 | /* clean up */
|
|---|
| 605 | hypre_TFree(delete_indices);
|
|---|
| 606 |
|
|---|
| 607 | /* return variables */
|
|---|
| 608 | *p_count_array = count_array;
|
|---|
| 609 | *p_vol_array = vol_array;
|
|---|
| 610 |
|
|---|
| 611 | return hypre_error_flag;
|
|---|
| 612 |
|
|---|
| 613 | }
|
|---|
| 614 |
|
|---|
| 615 |
|
|---|
| 616 | /******************************************************************************
|
|---|
| 617 | *
|
|---|
| 618 | * Given a list of regions, and corresponding volumes contained in regions
|
|---|
| 619 | * subdivide some of the regions that are not full enough
|
|---|
| 620 | *
|
|---|
| 621 | *****************************************************************************/
|
|---|
| 622 |
|
|---|
| 623 |
|
|---|
| 624 |
|
|---|
| 625 | int hypre_APRefineRegionsByVol( hypre_BoxArray *region_array, double *vol_array,
|
|---|
| 626 | int max_regions, double gamma, int dim, int *return_code,
|
|---|
| 627 | MPI_Comm comm)
|
|---|
| 628 | {
|
|---|
| 629 |
|
|---|
| 630 |
|
|---|
| 631 | int i, count, loop;
|
|---|
| 632 | int num_regions, init_num_regions;
|
|---|
| 633 | int *delete_indices;
|
|---|
| 634 |
|
|---|
| 635 | double *fraction_full;
|
|---|
| 636 | int *order;
|
|---|
| 637 | int myid, num_procs, est_size;
|
|---|
| 638 | int new;
|
|---|
| 639 | /* int regions_intact; */
|
|---|
| 640 |
|
|---|
| 641 |
|
|---|
| 642 | hypre_BoxArray *tmp_array;
|
|---|
| 643 | hypre_Box *box;
|
|---|
| 644 |
|
|---|
| 645 | MPI_Comm_rank(comm, &myid);
|
|---|
| 646 | MPI_Comm_size(comm, &num_procs);
|
|---|
| 647 |
|
|---|
| 648 | num_regions = hypre_BoxArraySize(region_array);
|
|---|
| 649 |
|
|---|
| 650 | if (!num_regions)
|
|---|
| 651 | {
|
|---|
| 652 | *return_code = 1; /* no regions - so no subdividing*/
|
|---|
| 653 | return hypre_error_flag;
|
|---|
| 654 |
|
|---|
| 655 | }
|
|---|
| 656 |
|
|---|
| 657 | fraction_full = hypre_CTAlloc(double, num_regions);
|
|---|
| 658 | order = hypre_CTAlloc(int, num_regions);
|
|---|
| 659 | delete_indices = hypre_CTAlloc(int, num_regions);
|
|---|
| 660 |
|
|---|
| 661 | for (i= 0; i< num_regions; i++)
|
|---|
| 662 | {
|
|---|
| 663 | box = hypre_BoxArrayBox(region_array, i);
|
|---|
| 664 | fraction_full[i] = (vol_array[i])/((double) hypre_doubleBoxVolume(box));
|
|---|
| 665 | order[i] = i; /*this is what order to access the boxes */
|
|---|
| 666 | }
|
|---|
| 667 |
|
|---|
| 668 | /* want to refine the regions starting with those that are the least full*/
|
|---|
| 669 | /* sort the fraction AND the index */
|
|---|
| 670 | hypre_qsort2(order, fraction_full, 0, num_regions-1);
|
|---|
| 671 |
|
|---|
| 672 |
|
|---|
| 673 | /*now we can subdivide any that are not full enough*/
|
|---|
| 674 | /* when this is called, we know that size < max_regions */
|
|---|
| 675 | /* it is ok to subdivde such that we have slightly more
|
|---|
| 676 | regions that max_region, but we do not want more regions
|
|---|
| 677 | than processors */
|
|---|
| 678 |
|
|---|
| 679 | tmp_array = hypre_BoxArrayCreate(0);
|
|---|
| 680 | count = 0; /*how many regions subdivided */
|
|---|
| 681 | loop = 0; /* counts the loop number */
|
|---|
| 682 | init_num_regions = num_regions;
|
|---|
| 683 | *return_code = 1; /* indicates all regions are at least gamma full -
|
|---|
| 684 | and no subdividing occured*/
|
|---|
| 685 |
|
|---|
| 686 | while (fraction_full[loop] < gamma)
|
|---|
| 687 | {
|
|---|
| 688 |
|
|---|
| 689 | /*some subdividing occurred*/
|
|---|
| 690 | *return_code = 2;
|
|---|
| 691 |
|
|---|
| 692 | /*we can't let the number of regions exceed the number
|
|---|
| 693 | of processors - only an issue for small proc numbers */
|
|---|
| 694 | est_size = num_regions + pow(2, dim) - 1;
|
|---|
| 695 | if (est_size > num_procs)
|
|---|
| 696 | {
|
|---|
| 697 | if (loop==0)
|
|---|
| 698 | {
|
|---|
| 699 | *return_code = 4; /* some are less than gamma full, but we cannot
|
|---|
| 700 | further subdivide due to max *processors*
|
|---|
| 701 | limit (no subdividing occured)*/
|
|---|
| 702 | }
|
|---|
| 703 |
|
|---|
| 704 | else
|
|---|
| 705 | {
|
|---|
| 706 | *return_code = 3;/* some subdividing occured, but there are some
|
|---|
| 707 | regions less than gamma full (max reached)
|
|---|
| 708 | that were not subdivided */
|
|---|
| 709 | }
|
|---|
| 710 |
|
|---|
| 711 | break;
|
|---|
| 712 | }
|
|---|
| 713 |
|
|---|
| 714 | box = hypre_BoxArrayBox(region_array, order[loop]);
|
|---|
| 715 | hypre_APSubdivideRegion(box, dim, 1, tmp_array, &new);
|
|---|
| 716 |
|
|---|
| 717 | if (new > 1) /* if new =1 then no subdividing occured */
|
|---|
| 718 | {
|
|---|
| 719 | num_regions = num_regions + new - 1; /* the orginal will be deleted*/
|
|---|
| 720 |
|
|---|
| 721 | delete_indices[count] = order[loop];
|
|---|
| 722 | count++; /* number of regions subdivided */
|
|---|
| 723 |
|
|---|
| 724 | /*append tmp_array to region array*/
|
|---|
| 725 | hypre_AppendBoxArray( tmp_array, region_array);
|
|---|
| 726 |
|
|---|
| 727 | }
|
|---|
| 728 |
|
|---|
| 729 |
|
|---|
| 730 |
|
|---|
| 731 | /* if we are on the last region */
|
|---|
| 732 | if ((loop+1) == init_num_regions)
|
|---|
| 733 | {
|
|---|
| 734 | break;
|
|---|
| 735 | }
|
|---|
| 736 |
|
|---|
| 737 | /* clear tmp_array for next loop */
|
|---|
| 738 | hypre_BoxArraySetSize(tmp_array, 0);
|
|---|
| 739 |
|
|---|
| 740 |
|
|---|
| 741 | /* if we now have too many regions - don't want to subdivide anymore*/
|
|---|
| 742 | if (num_regions >= max_regions)
|
|---|
| 743 | {
|
|---|
| 744 | /* see if next regions satifies gamma */
|
|---|
| 745 | if (fraction_full[order[loop+1]] > gamma)
|
|---|
| 746 | {
|
|---|
| 747 | *return_code = 5;/* all regions less than gamma full have been
|
|---|
| 748 | subdivided (and we have reached max)*/
|
|---|
| 749 | }
|
|---|
| 750 | else
|
|---|
| 751 | {
|
|---|
| 752 | *return_code = 3; /* there are some regions less than gamma
|
|---|
| 753 | full (but max is reached) */
|
|---|
| 754 | }
|
|---|
| 755 | break;
|
|---|
| 756 | }
|
|---|
| 757 |
|
|---|
| 758 | loop++; /* increment to repeat loop */
|
|---|
| 759 | }
|
|---|
| 760 |
|
|---|
| 761 |
|
|---|
| 762 | if (count ==0 )
|
|---|
| 763 | {
|
|---|
| 764 | *return_code = 1;
|
|---|
| 765 | /* no refining occured so don't do any more*/
|
|---|
| 766 | }
|
|---|
| 767 | else
|
|---|
| 768 | {
|
|---|
| 769 |
|
|---|
| 770 | /* so we subdivided count regions */
|
|---|
| 771 |
|
|---|
| 772 | /*delete the old regions*/
|
|---|
| 773 | qsort0(delete_indices, 0, count-1); /* put delete indices in asc. order */
|
|---|
| 774 | hypre_DeleteMultipleBoxes( region_array, delete_indices, count );
|
|---|
| 775 |
|
|---|
| 776 | }
|
|---|
| 777 |
|
|---|
| 778 | /* TO DO: number of regions intact (beginning of region array is intact)-
|
|---|
| 779 | may return this eventually*/
|
|---|
| 780 | /* regions_intact = init_num_regions - count;*/
|
|---|
| 781 |
|
|---|
| 782 |
|
|---|
| 783 | /* clean up */
|
|---|
| 784 | hypre_TFree(fraction_full);
|
|---|
| 785 | hypre_TFree(order);
|
|---|
| 786 | hypre_TFree(delete_indices);
|
|---|
| 787 | hypre_BoxArrayDestroy(tmp_array);
|
|---|
| 788 |
|
|---|
| 789 |
|
|---|
| 790 |
|
|---|
| 791 | return hypre_error_flag;
|
|---|
| 792 |
|
|---|
| 793 |
|
|---|
| 794 | }
|
|---|
| 795 |
|
|---|
| 796 |
|
|---|
| 797 | /******************************************************************************
|
|---|
| 798 | *
|
|---|
| 799 | * Construct an assumed partition
|
|---|
| 800 | *
|
|---|
| 801 | * 8/06 - changed the assumption that
|
|---|
| 802 | * that the local boxes have boxnums 0 to num(local_boxes)-1 (now need to pass in
|
|---|
| 803 | * boxnums)
|
|---|
| 804 | *****************************************************************************/
|
|---|
| 805 |
|
|---|
| 806 |
|
|---|
| 807 | int hypre_StructAssumedPartitionCreate(int dim, hypre_Box *bounding_box,
|
|---|
| 808 | double global_boxes_size,
|
|---|
| 809 | int global_num_boxes,
|
|---|
| 810 | hypre_BoxArray *local_boxes, int *local_boxnums,
|
|---|
| 811 | int max_regions, int max_refinements,
|
|---|
| 812 | double gamma,
|
|---|
| 813 | MPI_Comm comm,
|
|---|
| 814 | hypre_StructAssumedPart **p_assumed_partition)
|
|---|
| 815 | {
|
|---|
| 816 |
|
|---|
| 817 | int i, j, d;
|
|---|
| 818 | int size;
|
|---|
| 819 | int myid, num_procs;
|
|---|
| 820 | int count_array_size;
|
|---|
| 821 | int *count_array=NULL;
|
|---|
| 822 | double *vol_array=NULL, one_volume;
|
|---|
| 823 | int return_code;
|
|---|
| 824 | int num_refine;
|
|---|
| 825 | int total_boxes, proc_count, max_position, tmp_num;
|
|---|
| 826 | int *proc_array=NULL;
|
|---|
| 827 | int i1, i2, i11, i22, pos1, pos2, pos0;
|
|---|
| 828 | int tmp, ti1, ti2, t_tmp, t_total;
|
|---|
| 829 | double f1, f2, r,x_box, y_box, z_box, dbl_vol;
|
|---|
| 830 | int initial_level;
|
|---|
| 831 | int grow, grow_array[6];
|
|---|
| 832 |
|
|---|
| 833 |
|
|---|
| 834 | hypre_Index div_index;
|
|---|
| 835 | hypre_BoxArray *region_array;
|
|---|
| 836 | hypre_Box *box, *grow_box;
|
|---|
| 837 |
|
|---|
| 838 | hypre_StructAssumedPart *assumed_part;
|
|---|
| 839 |
|
|---|
| 840 |
|
|---|
| 841 | int proc_alloc, count, box_count;
|
|---|
| 842 | int max_response_size;
|
|---|
| 843 | int *response_buf = NULL, *response_buf_starts=NULL;
|
|---|
| 844 | int *tmp_box_nums = NULL, *tmp_proc_ids = NULL;
|
|---|
| 845 | int *proc_array_starts=NULL;
|
|---|
| 846 |
|
|---|
| 847 |
|
|---|
| 848 | hypre_BoxArray *my_partition;
|
|---|
| 849 | hypre_DataExchangeResponse response_obj;
|
|---|
| 850 |
|
|---|
| 851 | int *contact_boxinfo;
|
|---|
| 852 | int index;
|
|---|
| 853 |
|
|---|
| 854 |
|
|---|
| 855 |
|
|---|
| 856 |
|
|---|
| 857 | MPI_Comm_size(comm, &num_procs);
|
|---|
| 858 | MPI_Comm_rank(comm, &myid);
|
|---|
| 859 |
|
|---|
| 860 |
|
|---|
| 861 | /*FIRST DO ALL THE GLOBAL PARTITION INFO */
|
|---|
| 862 |
|
|---|
| 863 |
|
|---|
| 864 | /*initially divide the bounding box*/
|
|---|
| 865 |
|
|---|
| 866 | /*first modify any input parameters if necessary */
|
|---|
| 867 |
|
|---|
| 868 | /*don't want the number of regions exceeding the number of processors*/
|
|---|
| 869 | /* note: this doesn't change the value in the caller's code */
|
|---|
| 870 | max_regions = hypre_min(num_procs, max_regions);
|
|---|
| 871 |
|
|---|
| 872 |
|
|---|
| 873 | /* start with a region array of size 0*/
|
|---|
| 874 | region_array = hypre_BoxArrayCreate(0);
|
|---|
| 875 |
|
|---|
| 876 | /*if the bounding box is sufficiently covered by boxes then we will
|
|---|
| 877 | just have one region - the bounding box - otherwise we will subdivide
|
|---|
| 878 | probably just start with one level of division */
|
|---|
| 879 |
|
|---|
| 880 | /* one_volume = (double) hypre_BoxSizeX(bounding_box) *
|
|---|
| 881 | (double) hypre_BoxSizeY(bounding_box) * (double) hypre_BoxSizeZ(bounding_box); */
|
|---|
| 882 |
|
|---|
| 883 | one_volume = (double) hypre_doubleBoxVolume(bounding_box);
|
|---|
| 884 |
|
|---|
| 885 |
|
|---|
| 886 | if( ((global_boxes_size/one_volume) > gamma) ||
|
|---|
| 887 | ( global_num_boxes > one_volume) || global_num_boxes == 0 )
|
|---|
| 888 | {
|
|---|
| 889 | /*don't bother with any refinements - we are full enough -
|
|---|
| 890 | or we have a small bounding box
|
|---|
| 891 | and we are not full because of neg. boxes */
|
|---|
| 892 | initial_level = 0;
|
|---|
| 893 | max_refinements = 0;
|
|---|
| 894 |
|
|---|
| 895 | }
|
|---|
| 896 | else
|
|---|
| 897 | {
|
|---|
| 898 | initial_level = 1; /*we could let this be an input parameter
|
|---|
| 899 | - but I think 1 division is probably
|
|---|
| 900 | sufficient */
|
|---|
| 901 |
|
|---|
| 902 | /* start with the specified intial_levels for the original domain -
|
|---|
| 903 | unless we have a smaller number of procs */
|
|---|
| 904 | for (i= 0; i < initial_level; i++)
|
|---|
| 905 | {
|
|---|
| 906 | if ( pow(2,initial_level*dim) > num_procs) initial_level --;
|
|---|
| 907 |
|
|---|
| 908 | if (!initial_level) max_refinements = 0; /* we will not be able to do
|
|---|
| 909 | any refinements due to the
|
|---|
| 910 | number of processors*/
|
|---|
| 911 | }
|
|---|
| 912 | }
|
|---|
| 913 |
|
|---|
| 914 |
|
|---|
| 915 | #if NO_REFINE
|
|---|
| 916 | max_refinements = 0;
|
|---|
| 917 | initial_level = 0;
|
|---|
| 918 | #endif
|
|---|
| 919 |
|
|---|
| 920 |
|
|---|
| 921 |
|
|---|
| 922 | #if REFINE_INFO
|
|---|
| 923 | if (myid ==0)
|
|---|
| 924 | {
|
|---|
| 925 | printf("gamma = %g\n", gamma);
|
|---|
| 926 | printf("max_regions = %d\n", max_regions);
|
|---|
| 927 | printf("max_refinements = %d\n", max_refinements);
|
|---|
| 928 | printf("initial level = %d\n", initial_level);
|
|---|
| 929 | }
|
|---|
| 930 |
|
|---|
| 931 | #endif
|
|---|
| 932 |
|
|---|
| 933 |
|
|---|
| 934 | /*divide the bounding box */
|
|---|
| 935 | hypre_APSubdivideRegion(bounding_box, dim, initial_level, region_array,
|
|---|
| 936 | &size);
|
|---|
| 937 | /* if no subdividing occured (becuz too small) then don't try to refine */
|
|---|
| 938 | if (initial_level > 0 && size ==1) max_refinements = 0;
|
|---|
| 939 |
|
|---|
| 940 | /*need space for count and volume */
|
|---|
| 941 | size = hypre_BoxArraySize(region_array);
|
|---|
| 942 | count_array_size = size; /* memory allocation size */
|
|---|
| 943 | count_array = hypre_CTAlloc(int, size);
|
|---|
| 944 | vol_array = hypre_CTAlloc(double, size);
|
|---|
| 945 |
|
|---|
| 946 | /* how many boxes are in each region (global count) and what the volume is*/
|
|---|
| 947 | hypre_APGetAllBoxesInRegions( region_array, local_boxes, &count_array,
|
|---|
| 948 | &vol_array, comm );
|
|---|
| 949 |
|
|---|
| 950 | /* don't do any initial prune and shrink if we have only
|
|---|
| 951 | one region and we can't do any refinements */
|
|---|
| 952 |
|
|---|
| 953 | if ( !(size ==1 && max_refinements == 0))
|
|---|
| 954 | {
|
|---|
| 955 |
|
|---|
| 956 | /* get rid of regions with no boxes (and adjust count and vol arrays) */
|
|---|
| 957 | hypre_APPruneRegions( region_array, &count_array, &vol_array);
|
|---|
| 958 |
|
|---|
| 959 | /*shrink the extents*/
|
|---|
| 960 | hypre_APShrinkRegions( region_array, local_boxes, comm);
|
|---|
| 961 |
|
|---|
| 962 | }
|
|---|
| 963 |
|
|---|
| 964 | /* keep track of refinements */
|
|---|
| 965 | num_refine = 0;
|
|---|
| 966 |
|
|---|
| 967 |
|
|---|
| 968 | /* now we can keep refining by dividing the regions that are not
|
|---|
| 969 | full enough and eliminating empty regions */
|
|---|
| 970 | while (( hypre_BoxArraySize(region_array)< max_regions) &&
|
|---|
| 971 | (num_refine < max_refinements))
|
|---|
| 972 | {
|
|---|
| 973 | num_refine++;
|
|---|
| 974 |
|
|---|
| 975 | /* now calculate how full the regions are and subdivide the
|
|---|
| 976 | least full as needed */
|
|---|
| 977 |
|
|---|
| 978 |
|
|---|
| 979 | size = hypre_BoxArraySize(region_array);
|
|---|
| 980 |
|
|---|
| 981 | /* divide regions that are not full enough */
|
|---|
| 982 | hypre_APRefineRegionsByVol( region_array, vol_array,
|
|---|
| 983 | max_regions,
|
|---|
| 984 | gamma, dim, &return_code, comm );
|
|---|
| 985 |
|
|---|
| 986 |
|
|---|
| 987 | if (return_code == 1 || return_code == 4) /* 1 = all regions are at least
|
|---|
| 988 | gamma full - no subdividing
|
|---|
| 989 | occured */
|
|---|
| 990 | { /* 4 = no subdividing occured
|
|---|
| 991 | due to num_procs limit on
|
|---|
| 992 | regions*/
|
|---|
| 993 | break;
|
|---|
| 994 | }
|
|---|
| 995 | /* this is extraneous I think */
|
|---|
| 996 | if (size == hypre_BoxArraySize(region_array))
|
|---|
| 997 | {
|
|---|
| 998 | /* no dividing occured -exit the loop */
|
|---|
| 999 | break;
|
|---|
| 1000 | }
|
|---|
| 1001 |
|
|---|
| 1002 |
|
|---|
| 1003 | size = hypre_BoxArraySize(region_array);
|
|---|
| 1004 | if (size > count_array_size)
|
|---|
| 1005 | {
|
|---|
| 1006 | count_array = hypre_TReAlloc(count_array, int, size);
|
|---|
| 1007 | vol_array = hypre_TReAlloc(vol_array, double, size);
|
|---|
| 1008 | count_array_size =size;
|
|---|
| 1009 | }
|
|---|
| 1010 |
|
|---|
| 1011 | /* FUTURE MOD - just count and prune and shrink in the modified regions
|
|---|
| 1012 | from refineRegionsByVol - these are the last regions in the array */
|
|---|
| 1013 |
|
|---|
| 1014 | /* num boxes are in each region (global count) and what the volume is*/
|
|---|
| 1015 | hypre_APGetAllBoxesInRegions( region_array, local_boxes, &count_array,
|
|---|
| 1016 | &vol_array, comm );
|
|---|
| 1017 |
|
|---|
| 1018 | /* get rid of regions with no boxes (and adjust count and vol arrays) */
|
|---|
| 1019 | hypre_APPruneRegions( region_array, &count_array, &vol_array);
|
|---|
| 1020 |
|
|---|
| 1021 | /*shrink the extents*/
|
|---|
| 1022 | hypre_APShrinkRegions( region_array, local_boxes, comm);
|
|---|
| 1023 |
|
|---|
| 1024 |
|
|---|
| 1025 | /* actually 3 and 5 may be ok after pruning..but if no pruning then
|
|---|
| 1026 | exit the loop */
|
|---|
| 1027 |
|
|---|
| 1028 | if ( (return_code == 3 || return_code == 5)
|
|---|
| 1029 | && size ==hypre_BoxArraySize(region_array) )
|
|---|
| 1030 | /* 5 = all regions < gamma full
|
|---|
| 1031 | were subdivided and max
|
|---|
| 1032 | reached */
|
|---|
| 1033 | /* 3 = some regions were divided
|
|---|
| 1034 | (not all that needed) and max
|
|---|
| 1035 | reached */
|
|---|
| 1036 | {
|
|---|
| 1037 | break;
|
|---|
| 1038 | }
|
|---|
| 1039 |
|
|---|
| 1040 | }
|
|---|
| 1041 | /* end of refinements */
|
|---|
| 1042 |
|
|---|
| 1043 |
|
|---|
| 1044 | /*error checking */
|
|---|
| 1045 | hypre_ForBoxI(i, region_array)
|
|---|
| 1046 | {
|
|---|
| 1047 | if (hypre_BoxVolume(hypre_BoxArrayBox(region_array, i))==0)
|
|---|
| 1048 | {
|
|---|
| 1049 | if (myid ==0) printf("ERROR: a region has zero volume! "
|
|---|
| 1050 | "(this should never happen)");
|
|---|
| 1051 | }
|
|---|
| 1052 | }
|
|---|
| 1053 |
|
|---|
| 1054 |
|
|---|
| 1055 |
|
|---|
| 1056 | #if REGION_STAT
|
|---|
| 1057 | if (myid == 0) printf("myid = %d: %d REGIONS (after refining %d times accord. "
|
|---|
| 1058 | "to vol\n",
|
|---|
| 1059 | myid, hypre_BoxArraySize(region_array), num_refine);
|
|---|
| 1060 | #endif
|
|---|
| 1061 |
|
|---|
| 1062 |
|
|---|
| 1063 |
|
|---|
| 1064 | #if REGION_STAT
|
|---|
| 1065 | if (myid ==0)
|
|---|
| 1066 | {
|
|---|
| 1067 | printf("myid = %d, REGIONS (after refining %d times accord. to vol\n",
|
|---|
| 1068 | myid, num_refine);
|
|---|
| 1069 |
|
|---|
| 1070 | hypre_ForBoxI(i, region_array)
|
|---|
| 1071 | {
|
|---|
| 1072 | box = hypre_BoxArrayBox(region_array, i);
|
|---|
| 1073 | printf("myid = %d, %d: (%d, %d, %d) x (%d, %d, %d)\n",
|
|---|
| 1074 | myid, i,
|
|---|
| 1075 | hypre_BoxIMinX(box),
|
|---|
| 1076 | hypre_BoxIMinY(box),
|
|---|
| 1077 | hypre_BoxIMinZ(box),
|
|---|
| 1078 | hypre_BoxIMaxX(box),
|
|---|
| 1079 | hypre_BoxIMaxY(box),
|
|---|
| 1080 | hypre_BoxIMaxZ(box));
|
|---|
| 1081 | }
|
|---|
| 1082 | }
|
|---|
| 1083 | #endif
|
|---|
| 1084 |
|
|---|
| 1085 |
|
|---|
| 1086 | hypre_TFree(vol_array);
|
|---|
| 1087 |
|
|---|
| 1088 |
|
|---|
| 1089 | /* ------------------------------------------------------------------------*/
|
|---|
| 1090 | /*now we have the regions - construct the assumed partition */
|
|---|
| 1091 |
|
|---|
| 1092 | size = hypre_BoxArraySize(region_array);
|
|---|
| 1093 | assumed_part = hypre_TAlloc(hypre_StructAssumedPart, 1);
|
|---|
| 1094 | hypre_StructAssumedPartRegions(assumed_part) = region_array;
|
|---|
| 1095 | /*the above is aliased - so don't destroy region_array in this function */
|
|---|
| 1096 | hypre_StructAssumedPartNumRegions(assumed_part) = size;
|
|---|
| 1097 | hypre_StructAssumedPartDivisions(assumed_part) = hypre_CTAlloc(hypre_Index,
|
|---|
| 1098 | size);
|
|---|
| 1099 |
|
|---|
| 1100 | /* first determine which processors (how many) to assign to each region*/
|
|---|
| 1101 | proc_array = hypre_CTAlloc(int, size);
|
|---|
| 1102 | total_boxes = 0; /* this is different than the total number of
|
|---|
| 1103 | boxes as some boxes can be in more than
|
|---|
| 1104 | one region */
|
|---|
| 1105 | proc_count = 0;
|
|---|
| 1106 | d = -1;
|
|---|
| 1107 | max_position = -1;
|
|---|
| 1108 | /* calculate total number of boxes in the regions */
|
|---|
| 1109 | for (i=0; i < size; i++)
|
|---|
| 1110 | {
|
|---|
| 1111 | total_boxes += count_array[i];
|
|---|
| 1112 | }
|
|---|
| 1113 | /* calculate the fraction of actual boxes in each region, mult. by total number
|
|---|
| 1114 | of procs, put result in proc_array to
|
|---|
| 1115 | assign each region a number of processors proportional to the fraction
|
|---|
| 1116 | of boxes */
|
|---|
| 1117 | for (i=0; i < size; i++)
|
|---|
| 1118 | {
|
|---|
| 1119 |
|
|---|
| 1120 | if (!total_boxes) /* in case there are no boxes in a grid */
|
|---|
| 1121 | {
|
|---|
| 1122 | proc_array[i] = 0;
|
|---|
| 1123 | }
|
|---|
| 1124 | else
|
|---|
| 1125 | {
|
|---|
| 1126 | proc_array[i] = (int) hypre_round(((double)count_array[i]/
|
|---|
| 1127 | (double)total_boxes)* (double) num_procs);
|
|---|
| 1128 | }
|
|---|
| 1129 |
|
|---|
| 1130 | box = hypre_BoxArrayBox(region_array, i);
|
|---|
| 1131 | /* vol = hypre_BoxVolume(box); */
|
|---|
| 1132 | dbl_vol = hypre_doubleBoxVolume(box);
|
|---|
| 1133 |
|
|---|
| 1134 | /* can't have any zeros! */
|
|---|
| 1135 | if (!proc_array[i]) proc_array[i] = 1;
|
|---|
| 1136 |
|
|---|
| 1137 |
|
|---|
| 1138 | if (dbl_vol < (double) proc_array[i])
|
|---|
| 1139 | {
|
|---|
| 1140 | proc_array[i] = (int) dbl_vol; /*don't let the the number of procs be
|
|---|
| 1141 | greater than the volume - safe to case back to int if
|
|---|
| 1142 | this is true - then vol is not overflowing */
|
|---|
| 1143 | }
|
|---|
| 1144 |
|
|---|
| 1145 | proc_count += proc_array[i];
|
|---|
| 1146 | if (d < proc_array[i])
|
|---|
| 1147 | {
|
|---|
| 1148 | d = proc_array[i];
|
|---|
| 1149 | max_position = i;
|
|---|
| 1150 | }
|
|---|
| 1151 |
|
|---|
| 1152 | /* if (myid == 0) printf("proc array[%d] = %d\n", i, proc_array[i]);*/
|
|---|
| 1153 | }
|
|---|
| 1154 |
|
|---|
| 1155 |
|
|---|
| 1156 | hypre_TFree(count_array);
|
|---|
| 1157 |
|
|---|
| 1158 |
|
|---|
| 1159 |
|
|---|
| 1160 | /* adjust such that num_procs = proc_count (they should be close) */
|
|---|
| 1161 | /* a processor is only assigned to ONE region*/
|
|---|
| 1162 |
|
|---|
| 1163 | /* if we need a few more processors assigned
|
|---|
| 1164 | in proc_array for proc_count to = num_procs
|
|---|
| 1165 | (it is ok if we have fewer procs in proc_array
|
|---|
| 1166 | due to volume constraints */
|
|---|
| 1167 | while (num_procs > proc_count)
|
|---|
| 1168 | {
|
|---|
| 1169 | proc_array[max_position]++;
|
|---|
| 1170 |
|
|---|
| 1171 | if ( (double) proc_array[max_position] >
|
|---|
| 1172 | hypre_doubleBoxVolume(hypre_BoxArrayBox(region_array, max_position)))
|
|---|
| 1173 | {
|
|---|
| 1174 | proc_array[max_position]--;
|
|---|
| 1175 | break; /* some processors won't get assigned partitions */
|
|---|
| 1176 | }
|
|---|
| 1177 | proc_count++;
|
|---|
| 1178 | }
|
|---|
| 1179 |
|
|---|
| 1180 | /* if we we need fewer processors in proc_array*/
|
|---|
| 1181 | i = 0;
|
|---|
| 1182 | while (num_procs < proc_count)
|
|---|
| 1183 | {
|
|---|
| 1184 | if (proc_array[max_position] != 1)
|
|---|
| 1185 | {
|
|---|
| 1186 | proc_array[max_position]--;
|
|---|
| 1187 | }
|
|---|
| 1188 | else
|
|---|
| 1189 | {
|
|---|
| 1190 | while (proc_array[i] <=1 && i < size) /* size is the number of regions */
|
|---|
| 1191 | {
|
|---|
| 1192 | i++;
|
|---|
| 1193 | }
|
|---|
| 1194 | proc_array[i]--;
|
|---|
| 1195 | }
|
|---|
| 1196 | proc_count--;
|
|---|
| 1197 | }
|
|---|
| 1198 | /* the above logic would be flawed IF we allowed more regions
|
|---|
| 1199 | than processors, but this is not allowed! */
|
|---|
| 1200 |
|
|---|
| 1201 |
|
|---|
| 1202 | /*now we have the number of processors in each region so create the
|
|---|
| 1203 | processor partition */
|
|---|
| 1204 | /* size = # of regions */
|
|---|
| 1205 | hypre_StructAssumedPartProcPartitions(assumed_part) =
|
|---|
| 1206 | hypre_CTAlloc(int, size+ 1);
|
|---|
| 1207 | hypre_StructAssumedPartProcPartition(assumed_part, 0) = 0;
|
|---|
| 1208 | for (i=0; i< size; i++)
|
|---|
| 1209 | {
|
|---|
| 1210 | hypre_StructAssumedPartProcPartition(assumed_part, i+1) =
|
|---|
| 1211 | hypre_StructAssumedPartProcPartition(assumed_part, i) + proc_array[i];
|
|---|
| 1212 | }
|
|---|
| 1213 |
|
|---|
| 1214 |
|
|---|
| 1215 | /* now determine the NUMBER of divisions in the x, y amd z dir according
|
|---|
| 1216 | to the number or processors assigned to the region */
|
|---|
| 1217 |
|
|---|
| 1218 | /* FOR EACH REGION */
|
|---|
| 1219 | for (i = 0; i< size; i++)
|
|---|
| 1220 | {
|
|---|
| 1221 | proc_count = proc_array[i];
|
|---|
| 1222 | box = hypre_BoxArrayBox(region_array, i);
|
|---|
| 1223 | x_box = (double) hypre_BoxSizeX(box);
|
|---|
| 1224 | y_box = (double) hypre_BoxSizeY(box);
|
|---|
| 1225 | z_box = (double) hypre_BoxSizeZ(box);
|
|---|
| 1226 |
|
|---|
| 1227 |
|
|---|
| 1228 | /* this could be re-written so that the two
|
|---|
| 1229 | dimensions use the same code*/
|
|---|
| 1230 | if (dim == 2)
|
|---|
| 1231 | {
|
|---|
| 1232 |
|
|---|
| 1233 | /*dimension 2 */
|
|---|
| 1234 | if ( (x_box/y_box) > 1.0 )
|
|---|
| 1235 | {
|
|---|
| 1236 | f1 = x_box/y_box;
|
|---|
| 1237 | pos0 = 1; /* find y first */
|
|---|
| 1238 | pos1 = 0;
|
|---|
| 1239 |
|
|---|
| 1240 | }
|
|---|
| 1241 | else
|
|---|
| 1242 | {
|
|---|
| 1243 | f1 = y_box/x_box;
|
|---|
| 1244 | pos0 = 0; /* find x first */
|
|---|
| 1245 | pos1 = 1;
|
|---|
| 1246 |
|
|---|
| 1247 | }
|
|---|
| 1248 | i1 = (int) ceil(f1);
|
|---|
| 1249 | i11 = (int) floor(f1);
|
|---|
| 1250 |
|
|---|
| 1251 | /*case 1*/
|
|---|
| 1252 | r = (double) proc_count/ (double) i1;
|
|---|
| 1253 | ti1 = i1;
|
|---|
| 1254 | t_tmp = (int) ceil(sqrt(r));
|
|---|
| 1255 | t_total = t_tmp*t_tmp*i1;
|
|---|
| 1256 |
|
|---|
| 1257 | /* is this better?*/
|
|---|
| 1258 | r = (double) proc_count/ (double) i11;
|
|---|
| 1259 | tmp = (int) ceil(sqrt(r));
|
|---|
| 1260 | tmp_num = tmp*tmp*i11;
|
|---|
| 1261 | if (tmp_num < t_total && tmp_num >= proc_count)
|
|---|
| 1262 | {
|
|---|
| 1263 | ti1 = i11;
|
|---|
| 1264 | t_tmp = tmp;
|
|---|
| 1265 | t_total = tmp_num;
|
|---|
| 1266 | }
|
|---|
| 1267 |
|
|---|
| 1268 | if ( t_total < proc_count ) printf("ERROR: (this shouldn't happen) "
|
|---|
| 1269 | "the struct assumed partition doesn't"
|
|---|
| 1270 | "have enough partitions!!!\n");
|
|---|
| 1271 | hypre_IndexD(div_index, pos0) = t_tmp;
|
|---|
| 1272 | hypre_IndexD(div_index, pos1) = t_tmp*ti1;
|
|---|
| 1273 | hypre_IndexZ(div_index) = 1;
|
|---|
| 1274 |
|
|---|
| 1275 | }
|
|---|
| 1276 | else
|
|---|
| 1277 | {
|
|---|
| 1278 |
|
|---|
| 1279 | tmp = hypre_min(x_box, y_box);
|
|---|
| 1280 | tmp = hypre_min(tmp, z_box);
|
|---|
| 1281 |
|
|---|
| 1282 | if (tmp == x_box) /* x is smallest*/
|
|---|
| 1283 | {
|
|---|
| 1284 | f1 = (y_box/x_box);
|
|---|
| 1285 | f2 = (z_box/x_box);
|
|---|
| 1286 | pos0 = 0;
|
|---|
| 1287 | pos1 = 1;
|
|---|
| 1288 | pos2 = 2;
|
|---|
| 1289 |
|
|---|
| 1290 | }
|
|---|
| 1291 | else if (tmp == y_box) /*y is smallest */
|
|---|
| 1292 | {
|
|---|
| 1293 | f1 = (x_box/y_box);
|
|---|
| 1294 | f2 = (z_box/y_box);
|
|---|
| 1295 | pos0 = 1;
|
|---|
| 1296 | pos1 = 0;
|
|---|
| 1297 | pos2 = 2;
|
|---|
| 1298 | }
|
|---|
| 1299 | else /*z is smallest */
|
|---|
| 1300 | {
|
|---|
| 1301 | f1 = (x_box/z_box);
|
|---|
| 1302 | f2 = (y_box/z_box);
|
|---|
| 1303 | pos0 = 2;
|
|---|
| 1304 | pos1 = 0;
|
|---|
| 1305 | pos2 = 1;
|
|---|
| 1306 | }
|
|---|
| 1307 |
|
|---|
| 1308 | i1 = (int) ceil(f1);
|
|---|
| 1309 | i2 = (int) ceil(f2);
|
|---|
| 1310 | i11 = (int) floor(f1);
|
|---|
| 1311 | i22 = (int) floor(f2);
|
|---|
| 1312 |
|
|---|
| 1313 | /* case 0 - this will give a number of divisions > proc count */
|
|---|
| 1314 | r = (double) proc_count / (double) (i2*i1);
|
|---|
| 1315 | tmp = (int) ceil(pow(r,(1.0/3.0)));
|
|---|
| 1316 | tmp_num = tmp*tmp*tmp*i1*i2;
|
|---|
| 1317 |
|
|---|
| 1318 | ti1 = i1;
|
|---|
| 1319 | ti2 = i2;
|
|---|
| 1320 | t_tmp = tmp;
|
|---|
| 1321 | t_total = tmp_num;
|
|---|
| 1322 |
|
|---|
| 1323 | /* can we do better ? */
|
|---|
| 1324 | /*case 1: i11 and i2 */
|
|---|
| 1325 | r = (double) proc_count / (double) (i2*i11);
|
|---|
| 1326 | tmp = (int) ceil(pow(r,(1.0/3.0)));
|
|---|
| 1327 | tmp_num = tmp*tmp*tmp*i11*i2;
|
|---|
| 1328 | if (tmp_num < t_total && tmp_num >= proc_count)
|
|---|
| 1329 | {
|
|---|
| 1330 | ti1 = i11;
|
|---|
| 1331 | ti2 = i2;
|
|---|
| 1332 | t_tmp = tmp;
|
|---|
| 1333 | t_total = tmp_num;
|
|---|
| 1334 | }
|
|---|
| 1335 | /*case 2: i11 and i22 */
|
|---|
| 1336 | r = (double) proc_count / (double) (i22*i11);
|
|---|
| 1337 | tmp = (int) ceil(pow(r,(1.0/3.0)));
|
|---|
| 1338 | tmp_num = tmp*tmp*tmp*i11*i22;
|
|---|
| 1339 | if (tmp_num < t_total && tmp_num >= proc_count)
|
|---|
| 1340 | {
|
|---|
| 1341 | ti1 = i11;
|
|---|
| 1342 | ti2 = i22;
|
|---|
| 1343 | t_tmp = tmp;
|
|---|
| 1344 | t_total = tmp_num;
|
|---|
| 1345 | }
|
|---|
| 1346 | /*case 3: i1 and i22 */
|
|---|
| 1347 | r = (double) proc_count / (double) (i22*i1);
|
|---|
| 1348 | tmp = (int) ceil(pow(r,(1.0/3.0)));
|
|---|
| 1349 | tmp_num = tmp*tmp*tmp*i1*i22;
|
|---|
| 1350 | if (tmp_num < t_total && tmp_num >= proc_count)
|
|---|
| 1351 | {
|
|---|
| 1352 | ti1 = i1;
|
|---|
| 1353 | ti2 = i22;
|
|---|
| 1354 | t_tmp = tmp;
|
|---|
| 1355 | t_total = tmp_num;
|
|---|
| 1356 | }
|
|---|
| 1357 |
|
|---|
| 1358 | if ( t_total < proc_count ) printf("ERROR: (this shouldn't happen)"
|
|---|
| 1359 | " the struct assumed partition "
|
|---|
| 1360 | "doesn't have enough partitions!!!\n");
|
|---|
| 1361 |
|
|---|
| 1362 |
|
|---|
| 1363 | /*set final division */
|
|---|
| 1364 | hypre_IndexD(div_index, pos0) = t_tmp;
|
|---|
| 1365 | hypre_IndexD(div_index, pos1) = t_tmp*ti1;
|
|---|
| 1366 | hypre_IndexD(div_index, pos2) = t_tmp*ti2;
|
|---|
| 1367 |
|
|---|
| 1368 | }
|
|---|
| 1369 | /* end of finding divisions */
|
|---|
| 1370 |
|
|---|
| 1371 |
|
|---|
| 1372 | /*see if we can further reduce the number of assumed regions -
|
|---|
| 1373 | here we are effecting the aspect ratio but are avoiding an
|
|---|
| 1374 | excessive number of assumed regions
|
|---|
| 1375 | per processor. If the aspect ratio of the object is poor then
|
|---|
| 1376 | there can be many more assumed box divisions than processors for
|
|---|
| 1377 | small numbers of processors - so this should only iterate multiple
|
|---|
| 1378 | times for poor aspect ratios*/
|
|---|
| 1379 |
|
|---|
| 1380 | while (1)
|
|---|
| 1381 | {
|
|---|
| 1382 |
|
|---|
| 1383 | hypre_MaxIndexPosition(div_index, &d);
|
|---|
| 1384 | tmp = hypre_IndexD(div_index, d);
|
|---|
| 1385 | if ((tmp-1)==0) break;
|
|---|
| 1386 | hypre_IndexD(div_index, d) = tmp - 1;
|
|---|
| 1387 | tmp_num = (hypre_IndexX(div_index))*(hypre_IndexY(div_index))*
|
|---|
| 1388 | (hypre_IndexZ(div_index));
|
|---|
| 1389 | if (tmp_num < proc_count)
|
|---|
| 1390 | {
|
|---|
| 1391 | /* restore and exit */
|
|---|
| 1392 | hypre_IndexD(div_index, d) = tmp;
|
|---|
| 1393 | break;
|
|---|
| 1394 | }
|
|---|
| 1395 | }
|
|---|
| 1396 |
|
|---|
| 1397 | /*check to see that we won't have more than 2 assumed partitions per proc
|
|---|
| 1398 | this should never happen according to my proof :) */
|
|---|
| 1399 | tmp_num = (hypre_IndexX(div_index))*(hypre_IndexY(div_index))*
|
|---|
| 1400 | (hypre_IndexZ(div_index));
|
|---|
| 1401 | if ( tmp_num > 2*proc_count ) printf("ERROR: the struct assumed partition "
|
|---|
| 1402 | "has more than 2*procs (this "
|
|---|
| 1403 | "shouldn't happen) myid = %d, x = %d, y = %d, x = %d, proc_count = %d \n",myid, hypre_IndexX(div_index),
|
|---|
| 1404 | hypre_IndexY(div_index),hypre_IndexZ(div_index), proc_count);
|
|---|
| 1405 |
|
|---|
| 1406 |
|
|---|
| 1407 | hypre_CopyIndex(div_index, hypre_StructAssumedPartDivision(assumed_part, i));
|
|---|
| 1408 |
|
|---|
| 1409 | #if REGION_STAT
|
|---|
| 1410 | if ( myid ==0) printf("region = %d, proc_count = %d, divisions = [%d, %d, %d]\n",
|
|---|
| 1411 | i, proc_count,
|
|---|
| 1412 | hypre_IndexX(div_index), hypre_IndexY(div_index),
|
|---|
| 1413 | hypre_IndexZ(div_index));
|
|---|
| 1414 |
|
|---|
| 1415 | #endif
|
|---|
| 1416 | } /* end of FOR EACH REGION loop */
|
|---|
| 1417 |
|
|---|
| 1418 |
|
|---|
| 1419 |
|
|---|
| 1420 | /* NOW WE HAVE COMPLETED GLOBAL INFO - START FILLING IN LOCAL INFO */
|
|---|
| 1421 |
|
|---|
| 1422 |
|
|---|
| 1423 | /* now we need to populate the assumed partition object
|
|---|
| 1424 | with info specific to each processor, like which assumed partition
|
|---|
| 1425 | we own, which boxes are in that region, etc. */
|
|---|
| 1426 |
|
|---|
| 1427 | /* figure out my partition region and put it in the assumed_part structure*/
|
|---|
| 1428 | hypre_StructAssumedPartMyPartition(assumed_part) = hypre_BoxArrayCreate(2);
|
|---|
| 1429 | my_partition = hypre_StructAssumedPartMyPartition(assumed_part);
|
|---|
| 1430 | hypre_StructAssumedPartitionGetRegionsFromProc(assumed_part, myid, my_partition);
|
|---|
| 1431 | #if 0
|
|---|
| 1432 | hypre_ForBoxI(i, my_partition)
|
|---|
| 1433 | {
|
|---|
| 1434 | box = hypre_BoxArrayBox(my_partition, i);
|
|---|
| 1435 | printf("myid = %d: MY ASSUMED Partitions (%d): (%d, %d, %d) x "
|
|---|
| 1436 | "(%d, %d, %d)\n",
|
|---|
| 1437 | myid, i,
|
|---|
| 1438 | hypre_BoxIMinX(box),
|
|---|
| 1439 | hypre_BoxIMinY(box),
|
|---|
| 1440 | hypre_BoxIMinZ(box),
|
|---|
| 1441 | hypre_BoxIMaxX(box),
|
|---|
| 1442 | hypre_BoxIMaxY(box),
|
|---|
| 1443 | hypre_BoxIMaxZ(box));
|
|---|
| 1444 | }
|
|---|
| 1445 | #endif
|
|---|
| 1446 |
|
|---|
| 1447 |
|
|---|
| 1448 | /* find out the boxes in my partition - so I need to look through my boxes,
|
|---|
| 1449 | figure our which assumed parition (AP) they fall in and contact that
|
|---|
| 1450 | processor. we need to use the exchange data functionality for this */
|
|---|
| 1451 |
|
|---|
| 1452 | proc_alloc = 8;
|
|---|
| 1453 | proc_array = hypre_TReAlloc(proc_array, int, proc_alloc);
|
|---|
| 1454 |
|
|---|
| 1455 | /* probably there will mostly be one proc per box */
|
|---|
| 1456 | /* don't want to allocate too much memory here */
|
|---|
| 1457 | size = 1.2 * hypre_BoxArraySize(local_boxes);
|
|---|
| 1458 |
|
|---|
| 1459 | tmp_box_nums = hypre_CTAlloc(int, size);
|
|---|
| 1460 | tmp_proc_ids = hypre_CTAlloc(int, size);
|
|---|
| 1461 |
|
|---|
| 1462 | proc_count = 0;
|
|---|
| 1463 | count = 0; /* current number of procs */
|
|---|
| 1464 | grow_box = hypre_BoxCreate();
|
|---|
| 1465 |
|
|---|
| 1466 | hypre_ForBoxI(i, local_boxes)
|
|---|
| 1467 | {
|
|---|
| 1468 | box = hypre_BoxArrayBox(local_boxes, i);
|
|---|
| 1469 | if (hypre_BoxVolume(box) == 0) /* zero volume boxes - still
|
|---|
| 1470 | need to be in the partition*/
|
|---|
| 1471 | {
|
|---|
| 1472 | hypre_CopyBox(box, grow_box);
|
|---|
| 1473 | for (d = 0; d < 3; d++)
|
|---|
| 1474 | {
|
|---|
| 1475 | if(!hypre_BoxSizeD(box, d))
|
|---|
| 1476 | {
|
|---|
| 1477 | grow = (hypre_BoxIMinD(box, d) - hypre_BoxIMaxD(box, d) + 1)/2;
|
|---|
| 1478 | grow_array[2*d] = grow;
|
|---|
| 1479 | grow_array[2*d+1] = grow;
|
|---|
| 1480 | }
|
|---|
| 1481 | else
|
|---|
| 1482 | {
|
|---|
| 1483 | grow_array[2*d] = 0;
|
|---|
| 1484 | grow_array[2*d+1] = 0;
|
|---|
| 1485 | }
|
|---|
| 1486 | }
|
|---|
| 1487 | /* expand the grow box (leave our box untouched)*/
|
|---|
| 1488 | hypre_BoxExpand(grow_box, grow_array);
|
|---|
| 1489 |
|
|---|
| 1490 | /* NOTE - part of the box could lie outside of the regions */
|
|---|
| 1491 | hypre_StructAssumedPartitionGetProcsFromBox(assumed_part, grow_box,
|
|---|
| 1492 | &proc_count,
|
|---|
| 1493 | &proc_alloc, &proc_array);
|
|---|
| 1494 | }
|
|---|
| 1495 | else /* box with positive volume */
|
|---|
| 1496 | {
|
|---|
| 1497 | hypre_StructAssumedPartitionGetProcsFromBox(assumed_part, box, &proc_count,
|
|---|
| 1498 | &proc_alloc, &proc_array);
|
|---|
| 1499 | }
|
|---|
| 1500 |
|
|---|
| 1501 | /* do we need more storage? */
|
|---|
| 1502 | if ((count + proc_count) > size)
|
|---|
| 1503 | {
|
|---|
| 1504 | size = size + proc_count + 1.2*(hypre_BoxArraySize(local_boxes)-i);
|
|---|
| 1505 | /* printf("myid = %d, *adjust* alloc size = %d\n", myid, size); */
|
|---|
| 1506 | tmp_box_nums = hypre_TReAlloc(tmp_box_nums, int, size);
|
|---|
| 1507 | tmp_proc_ids = hypre_TReAlloc(tmp_proc_ids, int, size);
|
|---|
| 1508 | }
|
|---|
| 1509 | for (j = 0; j< proc_count; j++)
|
|---|
| 1510 | {
|
|---|
| 1511 |
|
|---|
| 1512 | /* tmp_box_nums[count] = i;*/ /*box numbers correspond to box order */
|
|---|
| 1513 | tmp_box_nums[count] = local_boxnums[i];
|
|---|
| 1514 | tmp_proc_ids[count] = proc_array[j];
|
|---|
| 1515 | count++;
|
|---|
| 1516 |
|
|---|
| 1517 | }
|
|---|
| 1518 | }
|
|---|
| 1519 |
|
|---|
| 1520 |
|
|---|
| 1521 | hypre_BoxDestroy(grow_box);
|
|---|
| 1522 |
|
|---|
| 1523 |
|
|---|
| 1524 | /*now we have two arrays: tmp_proc_ids and tmp_box_nums - these are
|
|---|
| 1525 | corresponding box numbers and proc. ids - we need to sort the
|
|---|
| 1526 | processor ids and then create a new
|
|---|
| 1527 | buffer to send to the exchange data function */
|
|---|
| 1528 |
|
|---|
| 1529 | /*sort the proc_ids */
|
|---|
| 1530 | hypre_qsort2i(tmp_proc_ids, tmp_box_nums, 0, count-1);
|
|---|
| 1531 |
|
|---|
| 1532 | /*now use proc_array for the processor ids to contact. we will use
|
|---|
| 1533 | box array to get our boxes and then pass the array only (not the
|
|---|
| 1534 | structure) to exchange data */
|
|---|
| 1535 | box_count = count;
|
|---|
| 1536 |
|
|---|
| 1537 | contact_boxinfo = hypre_CTAlloc(int, box_count*7);
|
|---|
| 1538 |
|
|---|
| 1539 | proc_array = hypre_TReAlloc(proc_array, int, box_count);
|
|---|
| 1540 | proc_array_starts = hypre_CTAlloc(int, box_count+1);
|
|---|
| 1541 | proc_array_starts[0] = 0;
|
|---|
| 1542 |
|
|---|
| 1543 | proc_count = 0;
|
|---|
| 1544 | index = 0;
|
|---|
| 1545 |
|
|---|
| 1546 | if (box_count)
|
|---|
| 1547 | {
|
|---|
| 1548 | proc_array[0] = tmp_proc_ids[0];
|
|---|
| 1549 |
|
|---|
| 1550 | contact_boxinfo[index++] = tmp_box_nums[0];
|
|---|
| 1551 | box = hypre_BoxArrayBox(local_boxes, tmp_box_nums[0]);
|
|---|
| 1552 | for (d=0; d< 3; d++)
|
|---|
| 1553 | {
|
|---|
| 1554 | contact_boxinfo[index++] = hypre_BoxIMinD(box, d);
|
|---|
| 1555 | contact_boxinfo[index++] = hypre_BoxIMaxD(box, d);
|
|---|
| 1556 | }
|
|---|
| 1557 | proc_count++;
|
|---|
| 1558 | }
|
|---|
| 1559 |
|
|---|
| 1560 | for (i=1; i< box_count; i++)
|
|---|
| 1561 | {
|
|---|
| 1562 | if (tmp_proc_ids[i] != proc_array[proc_count-1])
|
|---|
| 1563 | {
|
|---|
| 1564 | proc_array[proc_count] = tmp_proc_ids[i];
|
|---|
| 1565 | proc_array_starts[proc_count] = i;
|
|---|
| 1566 | proc_count++;
|
|---|
| 1567 |
|
|---|
| 1568 | }
|
|---|
| 1569 |
|
|---|
| 1570 | /* these boxes are not copied in a particular order -
|
|---|
| 1571 | they are sorted later */
|
|---|
| 1572 |
|
|---|
| 1573 | contact_boxinfo[index++] = tmp_box_nums[i];
|
|---|
| 1574 | box = hypre_BoxArrayBox(local_boxes, tmp_box_nums[i]);
|
|---|
| 1575 | for (d=0; d< 3; d++)
|
|---|
| 1576 | {
|
|---|
| 1577 | contact_boxinfo[index++] = hypre_BoxIMinD(box, d);
|
|---|
| 1578 | contact_boxinfo[index++] = hypre_BoxIMaxD(box, d);
|
|---|
| 1579 | }
|
|---|
| 1580 |
|
|---|
| 1581 | }
|
|---|
| 1582 | proc_array_starts[proc_count] = box_count;
|
|---|
| 1583 |
|
|---|
| 1584 | /* clean up */
|
|---|
| 1585 | hypre_TFree(tmp_proc_ids);
|
|---|
| 1586 | hypre_TFree(tmp_box_nums);
|
|---|
| 1587 |
|
|---|
| 1588 |
|
|---|
| 1589 | /* EXCHANGE DATA */
|
|---|
| 1590 |
|
|---|
| 1591 | /* prepare to populate the local info in the assumed partition */
|
|---|
| 1592 | hypre_StructAssumedPartMyPartitionBoxes(assumed_part)
|
|---|
| 1593 | = hypre_BoxArrayCreate(box_count);
|
|---|
| 1594 | hypre_BoxArraySetSize(hypre_StructAssumedPartMyPartitionBoxes(assumed_part), 0);
|
|---|
| 1595 | hypre_StructAssumedPartMyPartitionIdsSize(assumed_part) = 0;
|
|---|
| 1596 | hypre_StructAssumedPartMyPartitionIdsAlloc(assumed_part) = box_count;
|
|---|
| 1597 | hypre_StructAssumedPartMyPartitionProcIds(assumed_part)
|
|---|
| 1598 | = hypre_CTAlloc(int, box_count);
|
|---|
| 1599 | hypre_StructAssumedPartMyPartitionBoxnums(assumed_part)
|
|---|
| 1600 | = hypre_CTAlloc(int, box_count);
|
|---|
| 1601 | hypre_StructAssumedPartMyPartitionNumDistinctProcs(assumed_part) = 0;
|
|---|
| 1602 |
|
|---|
| 1603 | /* set up for exchanging data */
|
|---|
| 1604 | /* the response we expect is just a confirmation*/
|
|---|
| 1605 | response_buf = NULL;
|
|---|
| 1606 | response_buf_starts = NULL;
|
|---|
| 1607 |
|
|---|
| 1608 | /*response object*/
|
|---|
| 1609 | response_obj.fill_response = hypre_APFillResponseStructAssumedPart;
|
|---|
| 1610 | response_obj.data1 = assumed_part; /* where we keep info from contacts*/
|
|---|
| 1611 | response_obj.data2 = NULL;
|
|---|
| 1612 |
|
|---|
| 1613 | max_response_size = 0; /* no response data - just confirmation*/
|
|---|
| 1614 |
|
|---|
| 1615 | hypre_DataExchangeList(proc_count, proc_array,
|
|---|
| 1616 | contact_boxinfo, proc_array_starts,
|
|---|
| 1617 | 7*sizeof(int),
|
|---|
| 1618 | sizeof(int), &response_obj, max_response_size, 1,
|
|---|
| 1619 | comm, (void**) &response_buf, &response_buf_starts);
|
|---|
| 1620 |
|
|---|
| 1621 |
|
|---|
| 1622 | hypre_TFree(proc_array);
|
|---|
| 1623 | hypre_TFree(proc_array_starts);
|
|---|
| 1624 | hypre_TFree(response_buf);
|
|---|
| 1625 | hypre_TFree(response_buf_starts);
|
|---|
| 1626 | hypre_TFree(contact_boxinfo);
|
|---|
| 1627 |
|
|---|
| 1628 |
|
|---|
| 1629 |
|
|---|
| 1630 |
|
|---|
| 1631 | /* return vars */
|
|---|
| 1632 | *p_assumed_partition = assumed_part;
|
|---|
| 1633 |
|
|---|
| 1634 |
|
|---|
| 1635 | return hypre_error_flag;
|
|---|
| 1636 |
|
|---|
| 1637 | }
|
|---|
| 1638 |
|
|---|
| 1639 | /******************************************************************************
|
|---|
| 1640 | *
|
|---|
| 1641 | * Destroy the assumed partition
|
|---|
| 1642 | *
|
|---|
| 1643 | *****************************************************************************/
|
|---|
| 1644 |
|
|---|
| 1645 |
|
|---|
| 1646 | int hypre_StructAssumedPartitionDestroy(hypre_StructAssumedPart *assumed_part)
|
|---|
| 1647 | {
|
|---|
| 1648 |
|
|---|
| 1649 | if (assumed_part)
|
|---|
| 1650 | {
|
|---|
| 1651 |
|
|---|
| 1652 |
|
|---|
| 1653 | hypre_BoxArrayDestroy( hypre_StructAssumedPartRegions(assumed_part));
|
|---|
| 1654 | hypre_TFree(hypre_StructAssumedPartProcPartitions(assumed_part));
|
|---|
| 1655 | hypre_TFree(hypre_StructAssumedPartDivisions(assumed_part));
|
|---|
| 1656 | hypre_BoxArrayDestroy( hypre_StructAssumedPartMyPartition(assumed_part));
|
|---|
| 1657 | hypre_BoxArrayDestroy( hypre_StructAssumedPartMyPartitionBoxes(assumed_part));
|
|---|
| 1658 | hypre_TFree(hypre_StructAssumedPartMyPartitionProcIds(assumed_part));
|
|---|
| 1659 | hypre_TFree( hypre_StructAssumedPartMyPartitionBoxnums(assumed_part));
|
|---|
| 1660 |
|
|---|
| 1661 | /* this goes last! */
|
|---|
| 1662 | hypre_TFree(assumed_part);
|
|---|
| 1663 | }
|
|---|
| 1664 |
|
|---|
| 1665 |
|
|---|
| 1666 | return hypre_error_flag;
|
|---|
| 1667 |
|
|---|
| 1668 |
|
|---|
| 1669 | }
|
|---|
| 1670 |
|
|---|
| 1671 | /******************************************************************************
|
|---|
| 1672 | *
|
|---|
| 1673 | * fillResponseStructAssumedPart
|
|---|
| 1674 | *
|
|---|
| 1675 | *****************************************************************************/
|
|---|
| 1676 |
|
|---|
| 1677 | int
|
|---|
| 1678 | hypre_APFillResponseStructAssumedPart(void *p_recv_contact_buf,
|
|---|
| 1679 | int contact_size, int contact_proc, void *ro,
|
|---|
| 1680 | MPI_Comm comm, void **p_send_response_buf,
|
|---|
| 1681 | int *response_message_size )
|
|---|
| 1682 | {
|
|---|
| 1683 |
|
|---|
| 1684 | int size,alloc_size, myid, i, d, index;
|
|---|
| 1685 | int *ids, *boxnums;
|
|---|
| 1686 | int *recv_contact_buf;
|
|---|
| 1687 |
|
|---|
| 1688 | hypre_Box *box;
|
|---|
| 1689 |
|
|---|
| 1690 | hypre_BoxArray *part_boxes;
|
|---|
| 1691 | hypre_DataExchangeResponse *response_obj = ro;
|
|---|
| 1692 | hypre_StructAssumedPart *assumed_part = response_obj->data1;
|
|---|
| 1693 |
|
|---|
| 1694 |
|
|---|
| 1695 | /*initialize stuff */
|
|---|
| 1696 | MPI_Comm_rank(comm, &myid );
|
|---|
| 1697 |
|
|---|
| 1698 | part_boxes = hypre_StructAssumedPartMyPartitionBoxes(assumed_part);
|
|---|
| 1699 | ids = hypre_StructAssumedPartMyPartitionProcIds(assumed_part);
|
|---|
| 1700 | boxnums = hypre_StructAssumedPartMyPartitionBoxnums(assumed_part);
|
|---|
| 1701 |
|
|---|
| 1702 |
|
|---|
| 1703 | size = hypre_StructAssumedPartMyPartitionIdsSize(assumed_part);
|
|---|
| 1704 | alloc_size = hypre_StructAssumedPartMyPartitionIdsAlloc(assumed_part);
|
|---|
| 1705 |
|
|---|
| 1706 |
|
|---|
| 1707 | recv_contact_buf = (int * ) p_recv_contact_buf;
|
|---|
| 1708 |
|
|---|
| 1709 | /*increment how many procs have contacted us */
|
|---|
| 1710 | hypre_StructAssumedPartMyPartitionNumDistinctProcs(assumed_part)++;
|
|---|
| 1711 |
|
|---|
| 1712 |
|
|---|
| 1713 | /*check to see if we need to allocate more space for ids and boxnums*/
|
|---|
| 1714 | if ((size + contact_size) > alloc_size)
|
|---|
| 1715 | {
|
|---|
| 1716 |
|
|---|
| 1717 | alloc_size = size + contact_size;
|
|---|
| 1718 | ids = hypre_TReAlloc(ids, int, alloc_size);
|
|---|
| 1719 | boxnums = hypre_TReAlloc(boxnums, int, alloc_size);
|
|---|
| 1720 | hypre_StructAssumedPartMyPartitionIdsAlloc(assumed_part) = alloc_size;
|
|---|
| 1721 | }
|
|---|
| 1722 |
|
|---|
| 1723 |
|
|---|
| 1724 | box = hypre_BoxCreate();
|
|---|
| 1725 |
|
|---|
| 1726 | /* populate our assumed partition according to boxes received */
|
|---|
| 1727 | index=0;
|
|---|
| 1728 | for (i=0; i < contact_size; i++)
|
|---|
| 1729 | {
|
|---|
| 1730 | ids[size+i] = contact_proc; /*set the proc id*/
|
|---|
| 1731 | boxnums[size+i] = recv_contact_buf[index++];
|
|---|
| 1732 | for (d=0; d< 3; d++)
|
|---|
| 1733 | {
|
|---|
| 1734 | hypre_BoxIMinD(box, d)= recv_contact_buf[index++];
|
|---|
| 1735 | hypre_BoxIMaxD(box, d) = recv_contact_buf[index++];
|
|---|
| 1736 | }
|
|---|
| 1737 |
|
|---|
| 1738 | hypre_AppendBox(box, part_boxes);
|
|---|
| 1739 | }
|
|---|
| 1740 | /* adjust the size of the proc ids*/
|
|---|
| 1741 | hypre_StructAssumedPartMyPartitionIdsSize(assumed_part) = size + contact_size;
|
|---|
| 1742 |
|
|---|
| 1743 | /*in case more memory was allocated we have to assign these
|
|---|
| 1744 | pointers back */
|
|---|
| 1745 | hypre_StructAssumedPartMyPartitionBoxes(assumed_part) = part_boxes;
|
|---|
| 1746 | hypre_StructAssumedPartMyPartitionProcIds(assumed_part) = ids;
|
|---|
| 1747 | hypre_StructAssumedPartMyPartitionBoxnums(assumed_part) = boxnums;
|
|---|
| 1748 |
|
|---|
| 1749 |
|
|---|
| 1750 | /*output - no message to return (confirmation) */
|
|---|
| 1751 | *response_message_size = 0;
|
|---|
| 1752 |
|
|---|
| 1753 |
|
|---|
| 1754 | hypre_BoxDestroy(box);
|
|---|
| 1755 |
|
|---|
| 1756 |
|
|---|
| 1757 | return hypre_error_flag;
|
|---|
| 1758 |
|
|---|
| 1759 | }
|
|---|
| 1760 |
|
|---|
| 1761 |
|
|---|
| 1762 | /******************************************************************************
|
|---|
| 1763 | *
|
|---|
| 1764 | * Given a processor id, get that processor's assumed region(s)
|
|---|
| 1765 | *
|
|---|
| 1766 | * At most a processor has 2 assumed regions- pass in a BoxArray of size 2.
|
|---|
| 1767 | *****************************************************************************/
|
|---|
| 1768 |
|
|---|
| 1769 |
|
|---|
| 1770 | int hypre_StructAssumedPartitionGetRegionsFromProc( hypre_StructAssumedPart *assumed_part ,
|
|---|
| 1771 | int proc_id, hypre_BoxArray *assumed_regions)
|
|---|
| 1772 | {
|
|---|
| 1773 |
|
|---|
| 1774 |
|
|---|
| 1775 | int i;
|
|---|
| 1776 | int in_region, proc_count, proc_start, num_partitions;
|
|---|
| 1777 | int part_num, adj_part_num, x_row, y_row, extra, points, width;
|
|---|
| 1778 | int plane, xyplane, adj_proc_id;
|
|---|
| 1779 | int num_assumed, num_regions;
|
|---|
| 1780 |
|
|---|
| 1781 |
|
|---|
| 1782 | hypre_Box *region, *box;
|
|---|
| 1783 | hypre_Index div, isize, imin, imax;
|
|---|
| 1784 |
|
|---|
| 1785 |
|
|---|
| 1786 | num_regions = hypre_StructAssumedPartNumRegions(assumed_part);
|
|---|
| 1787 |
|
|---|
| 1788 |
|
|---|
| 1789 | /* check to see that this processor owns an assumed region - it is rare
|
|---|
| 1790 | that it won't (only if the # of procs > vol. of bounding box) */
|
|---|
| 1791 |
|
|---|
| 1792 | if (proc_id >= hypre_StructAssumedPartProcPartition(assumed_part,
|
|---|
| 1793 | num_regions))
|
|---|
| 1794 | {
|
|---|
| 1795 | /*owns no boxes */
|
|---|
| 1796 | num_assumed = 0;
|
|---|
| 1797 | }
|
|---|
| 1798 | else
|
|---|
| 1799 | {
|
|---|
| 1800 |
|
|---|
| 1801 | /* which partition region am i in? */
|
|---|
| 1802 | in_region = 0;
|
|---|
| 1803 | if ( num_regions > 1)
|
|---|
| 1804 | {
|
|---|
| 1805 | while (proc_id >= hypre_StructAssumedPartProcPartition(assumed_part,
|
|---|
| 1806 | in_region+1))
|
|---|
| 1807 | {
|
|---|
| 1808 | in_region++;
|
|---|
| 1809 | }
|
|---|
| 1810 | }
|
|---|
| 1811 |
|
|---|
| 1812 | /* how many processors in that region? */
|
|---|
| 1813 | proc_count = hypre_StructAssumedPartProcPartition(assumed_part, in_region+1)
|
|---|
| 1814 | - hypre_StructAssumedPartProcPartition(assumed_part, in_region);
|
|---|
| 1815 | /* first processor in the range */
|
|---|
| 1816 | proc_start = hypre_StructAssumedPartProcPartition(assumed_part, in_region);
|
|---|
| 1817 | /*get the region */
|
|---|
| 1818 | region = hypre_BoxArrayBox(hypre_StructAssumedPartRegions(assumed_part), in_region);
|
|---|
| 1819 | /* size of the regions */
|
|---|
| 1820 | hypre_BoxGetSize(region , isize);
|
|---|
| 1821 | /* get the divisions in each dimension */
|
|---|
| 1822 | hypre_CopyIndex(hypre_StructAssumedPartDivision(assumed_part, in_region), div);
|
|---|
| 1823 |
|
|---|
| 1824 | /* now calculate the assumed partition(s) (at most 2) that I own */
|
|---|
| 1825 | /* given: region, number and range of processors, number of divisions in
|
|---|
| 1826 | each dimension */
|
|---|
| 1827 |
|
|---|
| 1828 | num_partitions = hypre_IndexX(div)*hypre_IndexY(div)*hypre_IndexZ(div);
|
|---|
| 1829 | /* how many procs have 2 partitions instead of one*/
|
|---|
| 1830 | extra = num_partitions - proc_count*(num_partitions/proc_count);
|
|---|
| 1831 |
|
|---|
| 1832 | /* adjust the proc number to take into account the actual proceesor ids
|
|---|
| 1833 | assigned to the particular region */
|
|---|
| 1834 | /* now adj_proc_id range is 0 - (proc_count-1) */
|
|---|
| 1835 | adj_proc_id = proc_id - proc_start;
|
|---|
| 1836 |
|
|---|
| 1837 | /* the region is divided into partitions according to the number of
|
|---|
| 1838 | divisions in each directions => num_partitions. Some processors may
|
|---|
| 1839 | own more
|
|---|
| 1840 | than one partition (up to 2). These partitions are numbered from
|
|---|
| 1841 | L to R and
|
|---|
| 1842 | bottom to top. From the partition number then we can calculate the
|
|---|
| 1843 | processor
|
|---|
| 1844 | id. This is analogous to the 1-d ij case,
|
|---|
| 1845 | but is of course more complicated....*/
|
|---|
| 1846 |
|
|---|
| 1847 | /* get my partition number */
|
|---|
| 1848 | if (adj_proc_id < extra)
|
|---|
| 1849 | {
|
|---|
| 1850 | part_num = adj_proc_id*2;
|
|---|
| 1851 | num_assumed = 2;
|
|---|
| 1852 | }
|
|---|
| 1853 | else
|
|---|
| 1854 | {
|
|---|
| 1855 | part_num = extra+adj_proc_id;
|
|---|
| 1856 | num_assumed = 1;
|
|---|
| 1857 | }
|
|---|
| 1858 | }
|
|---|
| 1859 |
|
|---|
| 1860 | /* make sure BoxArray has been allocated and reflects the number of
|
|---|
| 1861 | boxes we need */
|
|---|
| 1862 | hypre_BoxArraySetSize(assumed_regions, num_assumed);
|
|---|
| 1863 |
|
|---|
| 1864 | /*where is part_num? numbering from L->R, bottom to top, 0 - (proc_count - 1)*/
|
|---|
| 1865 | for (i = 0; i< num_assumed; i++)
|
|---|
| 1866 | {
|
|---|
| 1867 |
|
|---|
| 1868 | part_num += i;
|
|---|
| 1869 |
|
|---|
| 1870 | /*find z coords first*/
|
|---|
| 1871 | xyplane = hypre_IndexX(div)*hypre_IndexY(div);
|
|---|
| 1872 | plane = part_num/xyplane;
|
|---|
| 1873 |
|
|---|
| 1874 | points = hypre_IndexZ(isize);
|
|---|
| 1875 | width = points / hypre_IndexZ(div);
|
|---|
| 1876 | extra = points - width* hypre_IndexZ(div);
|
|---|
| 1877 |
|
|---|
| 1878 | /* z start */
|
|---|
| 1879 | hypre_IndexZ(imin) = width*plane;
|
|---|
| 1880 | hypre_IndexZ(imin) += hypre_min(extra, plane);
|
|---|
| 1881 | /* z end */
|
|---|
| 1882 | hypre_IndexZ(imax) = width*(plane+1);
|
|---|
| 1883 | hypre_IndexZ(imax) += hypre_min(extra, plane+1);
|
|---|
| 1884 | hypre_IndexZ(imax) -= 1;
|
|---|
| 1885 | /*now change relative coordinates to absolute in z-dir*/
|
|---|
| 1886 | hypre_IndexZ(imin) += hypre_BoxIMinZ(region);
|
|---|
| 1887 | hypre_IndexZ(imax) += hypre_BoxIMinZ(region);
|
|---|
| 1888 |
|
|---|
| 1889 | /* now adjust the part_num to be in the lowest plane so
|
|---|
| 1890 | that we can figure the x and y coords*/
|
|---|
| 1891 | adj_part_num = part_num - plane*xyplane;
|
|---|
| 1892 |
|
|---|
| 1893 | /*x and y coords*/
|
|---|
| 1894 | /* x_row and y_row indicate the row that the partion is in
|
|---|
| 1895 | according to the number of divisions in each direction */
|
|---|
| 1896 | y_row = adj_part_num / hypre_IndexX(div);
|
|---|
| 1897 | x_row = adj_part_num % hypre_IndexX(div); /*mod */
|
|---|
| 1898 |
|
|---|
| 1899 | /* x */
|
|---|
| 1900 | points = hypre_IndexX(isize);
|
|---|
| 1901 | width = points / hypre_IndexX(div);
|
|---|
| 1902 | extra = points - width* hypre_IndexX(div);
|
|---|
| 1903 | /* x start */
|
|---|
| 1904 | hypre_IndexX(imin) = width*x_row;
|
|---|
| 1905 | hypre_IndexX(imin) += hypre_min(extra, x_row);
|
|---|
| 1906 | /* x end */
|
|---|
| 1907 | hypre_IndexX(imax) = width*(x_row+1);
|
|---|
| 1908 | hypre_IndexX(imax) += hypre_min(extra, x_row+1);
|
|---|
| 1909 | hypre_IndexX(imax) -= 1;
|
|---|
| 1910 | /*now change relative coordinates to absolute in x-dir*/
|
|---|
| 1911 | hypre_IndexX(imin) += hypre_BoxIMinX(region);
|
|---|
| 1912 | hypre_IndexX(imax) += hypre_BoxIMinX(region);
|
|---|
| 1913 |
|
|---|
| 1914 | /* y */
|
|---|
| 1915 | points = hypre_IndexY(isize);
|
|---|
| 1916 | width = points / hypre_IndexY(div);
|
|---|
| 1917 | extra = points - width* hypre_IndexY(div);
|
|---|
| 1918 | /* y start */
|
|---|
| 1919 | hypre_IndexY(imin) = width*y_row;
|
|---|
| 1920 | hypre_IndexY(imin) += hypre_min(extra, y_row);
|
|---|
| 1921 | /* y end */
|
|---|
| 1922 | hypre_IndexY(imax) = width*(y_row+1);
|
|---|
| 1923 | hypre_IndexY(imax) += hypre_min(extra, y_row+1);
|
|---|
| 1924 | hypre_IndexY(imax) -= 1;
|
|---|
| 1925 | /*now change relative coordinates to absolute in y-dir*/
|
|---|
| 1926 | hypre_IndexY(imin) += hypre_BoxIMinY(region);
|
|---|
| 1927 | hypre_IndexY(imax) += hypre_BoxIMinY(region);
|
|---|
| 1928 |
|
|---|
| 1929 | /* Note: a processor is only assigned a partition in 1 region */
|
|---|
| 1930 |
|
|---|
| 1931 | /* set the assumed region*/
|
|---|
| 1932 | box = hypre_BoxArrayBox(assumed_regions, i);
|
|---|
| 1933 | hypre_BoxSetExtents(box, imin, imax);
|
|---|
| 1934 |
|
|---|
| 1935 |
|
|---|
| 1936 | }
|
|---|
| 1937 |
|
|---|
| 1938 | /* some thoughts: if x and y division are even (or if x is even and all the
|
|---|
| 1939 | extras
|
|---|
| 1940 | the two partitions into one partition (they would be side by side in x-dir).
|
|---|
| 1941 | I think it may be better to leave them seperate in the interest of
|
|---|
| 1942 | reducing the search space for neighbor calculations */
|
|---|
| 1943 |
|
|---|
| 1944 | return hypre_error_flag;
|
|---|
| 1945 |
|
|---|
| 1946 |
|
|---|
| 1947 | }
|
|---|
| 1948 |
|
|---|
| 1949 |
|
|---|
| 1950 |
|
|---|
| 1951 | /******************************************************************************
|
|---|
| 1952 | *
|
|---|
| 1953 | * Given a box, which processor(s) assumed partition does the box intersect
|
|---|
| 1954 | *
|
|---|
| 1955 | * proc_array should be allocated to size_alloc_proc_array
|
|---|
| 1956 | *****************************************************************************/
|
|---|
| 1957 |
|
|---|
| 1958 |
|
|---|
| 1959 | int hypre_StructAssumedPartitionGetProcsFromBox( hypre_StructAssumedPart *assumed_part ,
|
|---|
| 1960 | hypre_Box *box,
|
|---|
| 1961 | int *num_proc_array,
|
|---|
| 1962 | int *size_alloc_proc_array,
|
|---|
| 1963 | int **p_proc_array)
|
|---|
| 1964 | {
|
|---|
| 1965 |
|
|---|
| 1966 | int i,j,k,r,myid;
|
|---|
| 1967 | int num_regions, in_regions, this_region, proc_count, proc_start;
|
|---|
| 1968 | int adj_proc_id, extra, num_partitions, part_num;
|
|---|
| 1969 | int gridpt[2], xyplane, extra_procs, switch_proc, points, width;
|
|---|
| 1970 | int switch_pt;
|
|---|
| 1971 |
|
|---|
| 1972 | int *proc_array, proc_array_count;
|
|---|
| 1973 | int *which_regions;
|
|---|
| 1974 | int *proc_ids, num_proc_ids, size_proc_ids;
|
|---|
| 1975 |
|
|---|
| 1976 |
|
|---|
| 1977 | hypre_Box *region;
|
|---|
| 1978 | hypre_Box *result_box;
|
|---|
| 1979 | hypre_Index div, isize, part_row[2];
|
|---|
| 1980 | hypre_BoxArray *region_array;
|
|---|
| 1981 |
|
|---|
| 1982 |
|
|---|
| 1983 | /* need myid only for the printf statement*/
|
|---|
| 1984 | MPI_Comm_rank(MPI_COMM_WORLD, &myid);
|
|---|
| 1985 |
|
|---|
| 1986 | proc_array = *p_proc_array;
|
|---|
| 1987 | region_array = hypre_StructAssumedPartRegions(assumed_part);
|
|---|
| 1988 | num_regions = hypre_StructAssumedPartNumRegions(assumed_part);
|
|---|
| 1989 |
|
|---|
| 1990 | /*first intersect the box to find out which region or regions(s) it lies in*/
|
|---|
| 1991 | /*then determine which processor owns the assumed part of the particular
|
|---|
| 1992 | regions(s) that it is in */
|
|---|
| 1993 |
|
|---|
| 1994 | result_box = hypre_BoxCreate();
|
|---|
| 1995 | which_regions = hypre_CTAlloc(int, num_regions);
|
|---|
| 1996 |
|
|---|
| 1997 | size_proc_ids = 8;
|
|---|
| 1998 | proc_ids = hypre_CTAlloc(int, size_proc_ids);
|
|---|
| 1999 | num_proc_ids = 0;
|
|---|
| 2000 |
|
|---|
| 2001 |
|
|---|
| 2002 | /* which partition region(s) am i in? */
|
|---|
| 2003 | in_regions = 0;
|
|---|
| 2004 | for (i = 0; i< num_regions; i++)
|
|---|
| 2005 | {
|
|---|
| 2006 | region = hypre_BoxArrayBox(region_array, i);
|
|---|
| 2007 | hypre_IntersectBoxes( box, region, result_box);
|
|---|
| 2008 | if ( hypre_BoxVolume(result_box) > 0 )
|
|---|
| 2009 | {
|
|---|
| 2010 | which_regions[in_regions] = i;
|
|---|
| 2011 | in_regions++;
|
|---|
| 2012 | }
|
|---|
| 2013 | }
|
|---|
| 2014 | if (in_regions == 0)
|
|---|
| 2015 | {
|
|---|
| 2016 | if (hypre_BoxVolume(box) > 0)
|
|---|
| 2017 | {
|
|---|
| 2018 | printf("MY_ID = %d Error: positive volume box (%d, %d, %d) x "
|
|---|
| 2019 | "(%d, %d, %d) not in any assumed regions! (this should never"
|
|---|
| 2020 | " happen)\n",
|
|---|
| 2021 | myid,
|
|---|
| 2022 | hypre_BoxIMinX(box),
|
|---|
| 2023 | hypre_BoxIMinY(box),
|
|---|
| 2024 | hypre_BoxIMinZ(box),
|
|---|
| 2025 | hypre_BoxIMaxX(box),
|
|---|
| 2026 | hypre_BoxIMaxY(box),
|
|---|
| 2027 | hypre_BoxIMaxZ(box));
|
|---|
| 2028 |
|
|---|
| 2029 | }
|
|---|
| 2030 | else
|
|---|
| 2031 | {
|
|---|
| 2032 | /*this is ok 12/04 - current use of function is only called on
|
|---|
| 2033 | pos. boxes*/
|
|---|
| 2034 | /* printf("MY_ID = %d Error: neg volume box not in partition\n",
|
|---|
| 2035 | myid);*/
|
|---|
| 2036 | }
|
|---|
| 2037 |
|
|---|
| 2038 | }
|
|---|
| 2039 |
|
|---|
| 2040 | /*for each region, who is assumed to own this box? add the proc number
|
|---|
| 2041 | to proc array */
|
|---|
| 2042 | for (r = 0; r< in_regions; r++)
|
|---|
| 2043 | {
|
|---|
| 2044 |
|
|---|
| 2045 | /* initialization for this particular region */
|
|---|
| 2046 | this_region = which_regions[r];
|
|---|
| 2047 | region = hypre_BoxArrayBox(region_array, this_region);
|
|---|
| 2048 | /* first processor in the range */
|
|---|
| 2049 | proc_start = hypre_StructAssumedPartProcPartition(assumed_part, this_region);
|
|---|
| 2050 | /* how many processors in that region? */
|
|---|
| 2051 | proc_count = hypre_StructAssumedPartProcPartition(assumed_part,
|
|---|
| 2052 | this_region+1)
|
|---|
| 2053 | -proc_start;
|
|---|
| 2054 | /* size of the regions */
|
|---|
| 2055 | hypre_BoxGetSize(region , isize);
|
|---|
| 2056 | /* get the divisons in each dimension */
|
|---|
| 2057 | hypre_CopyIndex(hypre_StructAssumedPartDivision(assumed_part,
|
|---|
| 2058 | this_region), div);
|
|---|
| 2059 |
|
|---|
| 2060 | /* number of partitions in this region? */
|
|---|
| 2061 | num_partitions = hypre_IndexX(div)*hypre_IndexY(div)*hypre_IndexZ(div);
|
|---|
| 2062 | /* how many procs have 2 partitions instead of one*/
|
|---|
| 2063 | extra_procs = num_partitions - proc_count*(num_partitions/proc_count);
|
|---|
| 2064 | switch_proc = 2*extra_procs;
|
|---|
| 2065 | /* size of the xy-plane */
|
|---|
| 2066 | xyplane = hypre_IndexX(div)*hypre_IndexY(div);
|
|---|
| 2067 |
|
|---|
| 2068 | /* get the location of a imin and imax indexes for this box
|
|---|
| 2069 | in terms of
|
|---|
| 2070 | the xrow, yrow, and zrow in the assumed partition
|
|---|
| 2071 | coordinates - store these in part_row[0] and part_row[1]
|
|---|
| 2072 | for imin and imax respectively */
|
|---|
| 2073 |
|
|---|
| 2074 | /*check each dimension - get the partition row info an put in part_row*/
|
|---|
| 2075 | for (i = 0; i< 3; i++)
|
|---|
| 2076 | {
|
|---|
| 2077 | /* first get the max and min grid point in this dimension
|
|---|
| 2078 | and change to coords relative to
|
|---|
| 2079 | the region (so relative means the min is (0,0,0)
|
|---|
| 2080 | - if a point is not in the region
|
|---|
| 2081 | then take the regions end point */
|
|---|
| 2082 | if (hypre_IndexDInBoxP(hypre_BoxIMin(box), i, region))
|
|---|
| 2083 | {
|
|---|
| 2084 | gridpt[0] = hypre_BoxIMinD(box, i) - hypre_BoxIMinD(region, i);
|
|---|
| 2085 | }
|
|---|
| 2086 | else /*grid point not in the region */
|
|---|
| 2087 | {
|
|---|
| 2088 | gridpt[0] = 0; /* 0 is the min *relative* corrd. */
|
|---|
| 2089 | }
|
|---|
| 2090 | if (hypre_IndexDInBoxP(hypre_BoxIMax(box), i, region))
|
|---|
| 2091 | {
|
|---|
| 2092 | gridpt[1] = hypre_BoxIMaxD(box, i) - hypre_BoxIMinD(region, i);
|
|---|
| 2093 | }
|
|---|
| 2094 | else /*grid point not in the region */
|
|---|
| 2095 | {
|
|---|
| 2096 | gridpt[1] = hypre_BoxIMaxD(region, i) - hypre_BoxIMinD(region, i);
|
|---|
| 2097 | }
|
|---|
| 2098 |
|
|---|
| 2099 | /* now find the correct part_row for this dimension*/
|
|---|
| 2100 |
|
|---|
| 2101 | points = hypre_IndexD(isize, i); /*size of the region in this dimension */
|
|---|
| 2102 | width = points / hypre_IndexD(div, i); /*width of a partition */
|
|---|
| 2103 | extra = points - width* hypre_IndexD(div, i);
|
|---|
| 2104 | switch_pt = (width + 1) * extra;
|
|---|
| 2105 |
|
|---|
| 2106 |
|
|---|
| 2107 | /* for imin(j=0) and imax (j=1) find the corresponding partition row*/
|
|---|
| 2108 | for (j=0; j< 2; j++)
|
|---|
| 2109 | {
|
|---|
| 2110 | if (gridpt[j] >= switch_pt)
|
|---|
| 2111 | {
|
|---|
| 2112 | hypre_IndexD(part_row[j], i)= extra + (gridpt[j] - switch_pt)/width;
|
|---|
| 2113 | }
|
|---|
| 2114 | else
|
|---|
| 2115 | {
|
|---|
| 2116 | hypre_IndexD(part_row[j], i) = gridpt[j]/(width+1);
|
|---|
| 2117 | }
|
|---|
| 2118 | }
|
|---|
| 2119 |
|
|---|
| 2120 | } /*end of for each dimension */
|
|---|
| 2121 |
|
|---|
| 2122 |
|
|---|
| 2123 | /*now we have the correct part_row for each of the box's corners since
|
|---|
| 2124 | we checked the max and min indexes - these correct partition rows
|
|---|
| 2125 | are stored in part_row */
|
|---|
| 2126 |
|
|---|
| 2127 |
|
|---|
| 2128 | /*find the partition number and proc_id for each of the 8 corner points*/
|
|---|
| 2129 | /* we get the location of the corner points from the location of imin and imax
|
|---|
| 2130 | which was determined above and stored in part_row*/
|
|---|
| 2131 |
|
|---|
| 2132 |
|
|---|
| 2133 | for (i = hypre_IndexX(part_row[0]); i<= hypre_IndexX(part_row[1]); i++) /* x*/
|
|---|
| 2134 | {
|
|---|
| 2135 | for (j = hypre_IndexY(part_row[0]); j <= hypre_IndexY(part_row[1]); j++) /*y*/
|
|---|
| 2136 | {
|
|---|
| 2137 | for (k = hypre_IndexZ(part_row[0]); k <= hypre_IndexZ(part_row[1]); k++) /*z*/
|
|---|
| 2138 | {
|
|---|
| 2139 |
|
|---|
| 2140 | part_num = 0;
|
|---|
| 2141 | /*move up in y */
|
|---|
| 2142 | part_num += j* hypre_IndexX(div);
|
|---|
| 2143 | /* move over in x*/
|
|---|
| 2144 | part_num += i;
|
|---|
| 2145 | /*adjust the plane for z*/
|
|---|
| 2146 | part_num += k*xyplane;
|
|---|
| 2147 |
|
|---|
| 2148 | /*convert the partition number to a processor number*/
|
|---|
| 2149 | if (part_num >= switch_proc)
|
|---|
| 2150 | {
|
|---|
| 2151 | adj_proc_id = extra_procs + (part_num - switch_proc);
|
|---|
| 2152 | }
|
|---|
| 2153 | else
|
|---|
| 2154 | {
|
|---|
| 2155 | adj_proc_id = part_num/2 ;
|
|---|
| 2156 | }
|
|---|
| 2157 |
|
|---|
| 2158 | if (num_proc_ids == size_proc_ids)
|
|---|
| 2159 | {
|
|---|
| 2160 | size_proc_ids+=8;
|
|---|
| 2161 | proc_ids = hypre_TReAlloc(proc_ids, int, size_proc_ids);
|
|---|
| 2162 | }
|
|---|
| 2163 |
|
|---|
| 2164 |
|
|---|
| 2165 | proc_ids[num_proc_ids] = adj_proc_id + proc_start;
|
|---|
| 2166 | num_proc_ids++;
|
|---|
| 2167 |
|
|---|
| 2168 | }
|
|---|
| 2169 | }
|
|---|
| 2170 | }
|
|---|
| 2171 |
|
|---|
| 2172 |
|
|---|
| 2173 | } /*end of for each region loop*/
|
|---|
| 2174 |
|
|---|
| 2175 |
|
|---|
| 2176 | if (in_regions)
|
|---|
| 2177 | {
|
|---|
| 2178 |
|
|---|
| 2179 | /* now determine unique values in proc_id array (could be duplicates -
|
|---|
| 2180 | do to a processor owning more than one partiton in a region)*/
|
|---|
| 2181 | /*sort the array*/
|
|---|
| 2182 | qsort0(proc_ids, 0, num_proc_ids-1);
|
|---|
| 2183 |
|
|---|
| 2184 | /*make sure we have enough space from proc_array*/
|
|---|
| 2185 | if (*size_alloc_proc_array < num_proc_ids)
|
|---|
| 2186 | {
|
|---|
| 2187 | proc_array = hypre_TReAlloc(proc_array, int, num_proc_ids);
|
|---|
| 2188 | *size_alloc_proc_array = num_proc_ids;
|
|---|
| 2189 | }
|
|---|
| 2190 |
|
|---|
| 2191 | /*put unique values in proc_array*/
|
|---|
| 2192 | proc_array[0] = proc_ids[0]; /*there will be at least one processor id */
|
|---|
| 2193 | proc_array_count = 1;
|
|---|
| 2194 | for (i=1; i< num_proc_ids; i++)
|
|---|
| 2195 | {
|
|---|
| 2196 | if (proc_ids[i] != proc_array[proc_array_count-1])
|
|---|
| 2197 | {
|
|---|
| 2198 | proc_array[proc_array_count] = proc_ids[i];
|
|---|
| 2199 | proc_array_count++;
|
|---|
| 2200 | }
|
|---|
| 2201 | }
|
|---|
| 2202 | }
|
|---|
| 2203 | else /*no processors for this box (neg. volume box) */
|
|---|
| 2204 | {
|
|---|
| 2205 | proc_array_count = 0;
|
|---|
| 2206 | }
|
|---|
| 2207 |
|
|---|
| 2208 |
|
|---|
| 2209 |
|
|---|
| 2210 | /*return variables */
|
|---|
| 2211 | *p_proc_array = proc_array;
|
|---|
| 2212 | *num_proc_array = proc_array_count;
|
|---|
| 2213 |
|
|---|
| 2214 |
|
|---|
| 2215 |
|
|---|
| 2216 | /*clean up*/
|
|---|
| 2217 | hypre_BoxDestroy(result_box);
|
|---|
| 2218 | hypre_TFree(which_regions);
|
|---|
| 2219 | hypre_TFree(proc_ids);
|
|---|
| 2220 |
|
|---|
| 2221 |
|
|---|
| 2222 | return hypre_error_flag;
|
|---|
| 2223 |
|
|---|
| 2224 |
|
|---|
| 2225 | }
|
|---|
| 2226 |
|
|---|