| [2aa6644] | 1 | /*BHEADER**********************************************************************
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| 2 | * Copyright (c) 2008, Lawrence Livermore National Security, LLC.
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| 3 | * Produced at the Lawrence Livermore National Laboratory.
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| 4 | * This file is part of HYPRE. See file COPYRIGHT for details.
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| 5 | *
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| 6 | * HYPRE is free software; you can redistribute it and/or modify it under the
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| 7 | * terms of the GNU Lesser General Public License (as published by the Free
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| 8 | * Software Foundation) version 2.1 dated February 1999.
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| 9 | *
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| 10 | * $Revision: 2.4 $
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| 11 | ***********************************************************************EHEADER*/
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| 12 |
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| 13 |
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| 14 |
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| 15 | /******************************************************************************
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| 16 | *
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| 17 | *****************************************************************************/
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| 18 |
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| 19 | #include "headers.h"
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| 20 |
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| 21 | /*==========================================================================*/
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| 22 | /*==========================================================================*/
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| 23 | /**
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| 24 | Augments measures by some random value between 0 and 1.
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| 25 |
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| 26 | {\bf Input files:}
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| 27 | headers.h
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| 28 |
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| 29 | @return Error code.
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| 30 |
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| 31 | @param S [IN]
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| 32 | parent graph matrix in CSR format
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| 33 | @param measure_array [IN/OUT]
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| 34 | measures assigned to each node of the parent graph
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| 35 |
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| 36 | @see hypre_AMGIndepSet */
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| 37 | /*--------------------------------------------------------------------------*/
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| 38 |
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| 39 | int
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| 40 | hypre_BoomerAMGIndepSetInit( hypre_ParCSRMatrix *S,
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| 41 | double *measure_array ,
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| 42 | int seq_rand)
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| 43 | {
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| 44 | hypre_CSRMatrix *S_diag = hypre_ParCSRMatrixDiag(S);
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| 45 | MPI_Comm comm = hypre_ParCSRMatrixComm(S);
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| 46 | int S_num_nodes = hypre_CSRMatrixNumRows(S_diag);
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| 47 | HYPRE_BigInt i;
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| 48 | int j, my_id;
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| 49 | int ierr = 0;
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| 50 |
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| 51 | MPI_Comm_rank(comm,&my_id);
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| 52 | j = 2747+my_id;
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| 53 | if (seq_rand) j = 2747;
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| 54 | hypre_SeedRand(j);
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| 55 | if (seq_rand)
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| 56 | {
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| 57 | for (i = 0; i < hypre_ParCSRMatrixFirstRowIndex(S); i++)
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| 58 | hypre_Rand();
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| 59 | }
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| 60 | for (j = 0; j < S_num_nodes; j++)
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| 61 | {
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| 62 | measure_array[j] += hypre_Rand();
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| 63 | }
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| 64 |
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| 65 | return (ierr);
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| 66 | }
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| 67 |
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| 68 | /*==========================================================================*/
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| 69 | /*==========================================================================*/
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| 70 | /**
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| 71 | Select an independent set from a graph. This graph is actually a
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| 72 | subgraph of some parent graph. The parent graph is described as a
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| 73 | matrix in compressed sparse row format, where edges in the graph are
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| 74 | represented by nonzero matrix coefficients (zero coefficients are
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| 75 | ignored). A positive measure is given for each node in the
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| 76 | subgraph, and this is used to pick the independent set. A measure
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| 77 | of zero must be given for all other nodes in the parent graph. The
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| 78 | subgraph is a collection of nodes in the parent graph.
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| 79 |
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| 80 | Positive entries in the `IS\_marker' array indicate nodes in the
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| 81 | independent set. All other entries are zero.
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| 82 |
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| 83 | The algorithm proceeds by first setting all nodes in `graph\_array'
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| 84 | to be in the independent set. Nodes are then removed from the
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| 85 | independent set by simply comparing the measures of adjacent nodes.
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| 86 |
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| 87 | {\bf Input files:}
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| 88 | headers.h
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| 89 |
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| 90 | @return Error code.
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| 91 |
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| 92 | @param S [IN]
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| 93 | parent graph matrix in CSR format
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| 94 | @param measure_array [IN]
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| 95 | measures assigned to each node of the parent graph
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| 96 | @param graph_array [IN]
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| 97 | node numbers in the subgraph to be partitioned
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| 98 | @param graph_array_size [IN]
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| 99 | number of nodes in the subgraph to be partitioned
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| 100 | @param IS_marker [IN/OUT]
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| 101 | marker array for independent set
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| 102 |
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| 103 | @see hypre_InitAMGIndepSet */
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| 104 | /*--------------------------------------------------------------------------*/
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| 105 |
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| 106 | int
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| 107 | hypre_BoomerAMGIndepSet( hypre_ParCSRMatrix *S,
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| 108 | double *measure_array,
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| 109 | int *graph_array,
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| 110 | int graph_array_size,
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| 111 | int *graph_array_offd,
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| 112 | int graph_array_offd_size,
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| 113 | int *IS_marker,
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| 114 | int *IS_marker_offd )
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| 115 | {
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| 116 | hypre_CSRMatrix *S_diag = hypre_ParCSRMatrixDiag(S);
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| 117 | int *S_diag_i = hypre_CSRMatrixI(S_diag);
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| 118 | int *S_diag_j = hypre_CSRMatrixJ(S_diag);
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| 119 | hypre_CSRMatrix *S_offd = hypre_ParCSRMatrixOffd(S);
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| 120 | int *S_offd_i = hypre_CSRMatrixI(S_offd);
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| 121 | int *S_offd_j;
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| 122 |
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| 123 | int local_num_vars = hypre_CSRMatrixNumRows(S_diag);
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| 124 | int i, j, ig, jS, jj;
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| 125 |
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| 126 | int ierr = 0;
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| 127 |
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| 128 | /*-------------------------------------------------------
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| 129 | * Initialize IS_marker by putting all nodes in
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| 130 | * the independent set.
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| 131 | *-------------------------------------------------------*/
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| 132 |
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| 133 | if (hypre_CSRMatrixNumCols(S_offd))
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| 134 | {
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| 135 | S_offd_j = hypre_CSRMatrixJ(S_offd);
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| 136 | }
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| 137 |
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| 138 | for (ig = 0; ig < graph_array_size; ig++)
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| 139 | {
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| 140 | i = graph_array[ig];
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| 141 | if (measure_array[i] > 1)
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| 142 | {
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| 143 | IS_marker[i] = 1;
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| 144 | }
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| 145 | }
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| 146 | for (ig = 0; ig < graph_array_offd_size; ig++)
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| 147 | {
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| 148 | i = graph_array_offd[ig];
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| 149 | if (measure_array[i+local_num_vars] > 1)
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| 150 | {
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| 151 | IS_marker_offd[i] = 1;
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| 152 | }
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| 153 | }
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| 154 |
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| 155 | /*-------------------------------------------------------
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| 156 | * Remove nodes from the initial independent set
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| 157 | *-------------------------------------------------------*/
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| 158 |
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| 159 | for (ig = 0; ig < graph_array_size; ig++)
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| 160 | {
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| 161 | i = graph_array[ig];
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| 162 | if (measure_array[i] > 1)
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| 163 | {
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| 164 | for (jS = S_diag_i[i]; jS < S_diag_i[i+1]; jS++)
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| 165 | {
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| 166 | j = S_diag_j[jS];
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| 167 | if (j < 0) j = -j-1;
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| 168 |
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| 169 | /* only consider valid graph edges */
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| 170 | /* if ( (measure_array[j] > 1) && (S_diag_data[jS]) ) */
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| 171 | if (measure_array[j] > 1)
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| 172 | {
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| 173 | if (measure_array[i] > measure_array[j])
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| 174 | {
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| 175 | IS_marker[j] = 0;
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| 176 | }
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| 177 | else if (measure_array[j] > measure_array[i])
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| 178 | {
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| 179 | IS_marker[i] = 0;
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| 180 | }
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| 181 | }
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| 182 | }
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| 183 | for (jS = S_offd_i[i]; jS < S_offd_i[i+1]; jS++)
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| 184 | {
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| 185 | jj = S_offd_j[jS];
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| 186 | if (jj < 0) jj = -jj-1;
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| 187 | j = local_num_vars+jj;
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| 188 |
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| 189 | /* only consider valid graph edges */
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| 190 | /* if ( (measure_array[j] > 1) && (S_offd_data[jS]) ) */
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| 191 | if (measure_array[j] > 1)
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| 192 | {
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| 193 | if (measure_array[i] > measure_array[j])
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| 194 | {
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| 195 | IS_marker_offd[jj] = 0;
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| 196 | }
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| 197 | else if (measure_array[j] > measure_array[i])
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| 198 | {
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| 199 | IS_marker[i] = 0;
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| 200 | }
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| 201 | }
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| 202 | }
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| 203 | }
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| 204 | }
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| 205 |
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| 206 | return (ierr);
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| 207 | }
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| 208 |
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